DR908853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908853 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.807e-17 Identity = 50/124 (40.32%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 222 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGR-----------NNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 560 +KLF RW +EDV V D L DYI ++ +P++ GR+ RF KA+ PI+ERL LM G GKK A +I+ EII T QNP++V V A+ N+ PRE+ T I Sbjct: 3 MKLFGRWDYEDVTVEDPGLRDYINLKPM----LIPYSGGRHQKHRFGKAKIPIIERLAGRLMTSGHLGKKHKWTSEHQTGKKYNAYKIIIRTFEIIEKRTKQNPLKVFVKAIENAAPREETTTI 122
BLAST of DR908853 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 228 LFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMH---------GRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 560 LF +W D++V D L I ++ +P+T GR ++KRF KA IVERL N MMH GR GKK+ ++ VK A EII+L T +NP++V+V AV NS P ED TRI Sbjct: 9 LFRKWDLSDIEVVDPGLKTAISLRKMT----LPYTYGRSALKRFNKADANIVERLANK-MMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRI 123
BLAST of DR908853 vs. ExPASy Swiss-Prot
Match: RS7_HALWD (30S ribosomal protein S7P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps7p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.968e-17 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 198 DPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 560 D + KLF W +++ D S YI V T + HT GR++ K+F K++ +VERL N LM N G K + IV+ A + IH T++NP+QV+V V N+ PRE+ R+ Sbjct: 37 DTDTASANAKLFGEWDVSEIEYEDPSTQRYITV------TPIAHTMGRHAAKQFEKSKISVVERLINRLMQTEDNTGHKQKTMNIVEDAFDTIHNRTEENPVQVLVRGVENAAPREETVRL 151
BLAST of DR908853 vs. ExPASy Swiss-Prot
Match: RS7_THEAC (30S ribosomal protein S7P OS=Thermoplasma acidophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.592e-16 Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 228 LFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 560 LFN++ V+++D + YI V++A N HT GR+S K +VERL N LM + GKK A +I + A +II T QNP+Q++++A+ N+GPRE+ TR+ Sbjct: 2 LFNKYDVNAVEIHDPGMVKYINVKSALNL----HTGGRFSSYYAGKINMNVVERLINKLMRSEKWTGKKYSAYKITEEAFQIIAEKTKQNPLQILINAIENAGPREEVTRL 108
BLAST of DR908853 vs. ExPASy Swiss-Prot
Match: RS7_THEVO (30S ribosomal protein S7P OS=Thermoplasma volcanium GN=rps7p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.916e-16 Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 228 LFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 560 LF+++ V+V+D + YI V++A N HT GR+S K +VERL N LM + GKK A +I K A +II T QNP+Q++++A+ N+GPRE+ TR+ Sbjct: 2 LFDKYDVNSVEVHDPGMVKYINVKSALNL----HTGGRFSSYYAGKINMNVVERLINKLMRTEKWTGKKYSAYKITKDAFDIIADKTKQNPLQILINAIENAGPREEVTRL 108
BLAST of DR908853 vs. ExPASy Swiss-Prot
Match: RS7_PICTO (30S ribosomal protein S7P OS=Picrophilus torridus GN=rps7p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15 Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 219 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 560 D + ++ +Q++D+ L+ YI + N+ + HT GRYS K +ERL N LM + GKK A R++K A EI+ T QNP+QV+++A+ NS PRE+ TR+ Sbjct: 2 DRLIMGKYDVSGIQIHDMGLAKYINL----NSYFNLHTGGRYSNYSAGKRNVNTIERLLNKLMRTEKWTGKKYSAYRVLKEAFEIVEQKTKQNPVQVLINAIENSAPREEVTRL 111 The following BLAST results are available for this feature:
BLAST of DR908853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908853 ID=DR908853; Name=DR908853; organism=Citrus sinensis; type=EST; length=571bpback to top |