CN189727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER_SYNLI (Ferredoxin OS=Synechococcus lividus PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 7.699e-32 Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 2 Query: 152 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 MA YK+ L+ P GE + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +H+EEEL Sbjct: 1 MATYKVTLVRPDGET-TIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEEL 96
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.006e-31 Identity = 63/98 (64.29%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 152 MAVYKIKLIGPK-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 MA YK+ LI + G E +D+YILD AEE G+DLPYSCRAGACSTCAGK+ G +DQSD SFLDD+Q+EAGY+LTC++YP SDC I +H+EEEL Sbjct: 1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 98
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER1_SYNP2 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petF PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.006e-31 Identity = 65/97 (67.01%), Postives = 82/97 (84.54%), Query Frame = 2 Query: 152 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 MA YK+ LI P GE ++A +D+YILD+A +AG DLP SCRAGACSTCAGK+VSG+VDQS+ SFLDD+Q+EAGY+LTCI+YP SD I+++KEEEL Sbjct: 1 MATYKVTLITPDGEV-SYDAPDDEYILDSAGDAGYDLPASCRAGACSTCAGKIVSGTVDQSEQSFLDDDQIEAGYVLTCIAYPQSDVTIETNKEEEL 96
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER1_CYACA (Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.006e-31 Identity = 64/98 (65.31%), Postives = 78/98 (79.59%), Query Frame = 2 Query: 152 MAVYKIKLIGPK-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 M YK+KL K G + E DQYILDAAEE G+DLPYSCRAGACSTCAGKL+SG+VDQSD SFLDD Q++ G++LTC++YPTS+C I +H+EE L Sbjct: 1 MTSYKVKLTNEKEGIDVEINCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEAL 98
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.313e-31 Identity = 62/96 (64.58%), Postives = 79/96 (82.29%), Query Frame = 2 Query: 155 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 A YK+KL+ P G EFE +D+YILD AEE G DLPYSCRAG+CS+CAGK+ +GSVDQSDG+FLDD+Q+ G++LTC++YP SD I++HKEEEL Sbjct: 1 ATYKVKLVTPDGPV-EFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.313e-31 Identity = 68/123 (55.28%), Postives = 92/123 (74.80%), Query Frame = 2 Query: 80 TSLGSVKGISKT-FGLKCSPNFQAS-MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 TSL + + + FGLK + + + MA YK+KLI P G EF+ ++ YILD AEEAG DLPYSCRAG+CS+CAGK+ G+VDQ+DG+FLDD+Q+E G++LTC++YP SD I++HKE EL Sbjct: 21 TSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPI-EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL 142
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER1_SYNP6 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF1 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.313e-31 Identity = 63/98 (64.29%), Postives = 80/98 (81.63%), Query Frame = 2 Query: 152 MAVYKIKLIGP-KGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 MA YK+ L+ +G + +D YILDAAEE G+DLPYSCRAGACSTCAGK+VSG+VDQSD SFLDD+Q+ AG++LTC++YPTSD I++HKEE+L Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER1_SYNE7 (Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.313e-31 Identity = 63/98 (64.29%), Postives = 80/98 (81.63%), Query Frame = 2 Query: 152 MAVYKIKLIGP-KGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 MA YK+ L+ +G + +D YILDAAEE G+DLPYSCRAGACSTCAGK+VSG+VDQSD SFLDD+Q+ AG++LTC++YPTSD I++HKEE+L Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.715e-31 Identity = 62/98 (63.27%), Postives = 80/98 (81.63%), Query Frame = 2 Query: 152 MAVYKIKLIGP-KGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 M +K+ LI +G E +D+YILDAAEE G+DLPYSCRAGACSTCAGK+ +G+VDQSD SFLDD+Q++AGY+LTC++YPTSDC I +H+EE+L Sbjct: 1 MPSFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98
BLAST of CN189727 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.240e-31 Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 2 Query: 155 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 442 A YK+KL+ P G++ EF+ +D YILD AEE G+DLPYSCRAG+CS+CAGK+ G VDQSDGSFLDD Q+ G++LTC++YP SD I++HKEEEL Sbjct: 1 ATYKVKLVTPSGQQ-EFQCPDDVYILDQAEEVGIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSDGTIETHKEEEL 95 The following BLAST results are available for this feature:
BLAST of CN189727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189727 ID=CN189727; Name=CN189727; organism=Citrus sinensis; type=EST; length=656bpback to top |