DR908850

Overview
NameDR908850
Unique NameDR908850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  521 EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 275
            EAEKYK+EDE +K ++EAKN LENY+YN+RNT+ DEK+  ++   DKK IED + + I WLD+NQ AE +E+E K KELE I NPI+ KMY
Sbjct:  524 EAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMY 614          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 55/92 (59.78%), Postives = 71/92 (77.17%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  521 EAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
The following BLAST results are available for this feature:
BLAST of DR908850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
HSP7C_SAGOE1.264e-2658.70Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT1.264e-2658.70Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB1.264e-2658.70Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE1.264e-2658.70Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN1.264e-2658.70Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.264e-2658.70Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR1.264e-2658.70Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN1.264e-2658.70Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP70_BRELC1.264e-2659.34Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HS71B_PIG1.264e-2659.78Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16978 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-38_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908850 ID=DR908850; Name=DR908850; organism=Citrus sinensis; type=EST; length=572bp
AAGAGGCCGAGAAGTACAAGGCTGAAGACGAGGAGCACAAGAAGAAGGTC
GAGGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGT
CAAGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGA
TTGAGGATGCCATTGATCAGGCAATTCAATGGCTTGATAGCAACCAGCTG
GCTGAGGCCGATGAATTTGAAGACAAGATGAAGGAGCTTGAGAGCATCTG
CAATCCCATCATTGCCAAGATGTATCAAGGTGCTGGTGGTGATATGGGCG
GTGGCATGGATGATGATGCTCCTCCAGCTGGTGGCAGTGCCGCCGGTCCC
AAGATTGAGGAAGTTGACTAAGCTTCCAGTTTTATTTTGTTGTGTTTGTG
GGAGGTCGGTTTTTTGACGGTGGGAAAACTGGACGTTTGGTTTTTATCTT
ATGTTGTTTTAGCCTTAGGATGAATATTAATTTTTCCTTTTCTTTTTATT
TTTCAAATTTTACTTTTAATTCGGACCAATTTATATAATGAATATTTTTT
CGGTCCCTAAAAAAAAAAAAAA
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