DR908850

Overview
NameDR908850
Unique NameDR908850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22
Identity = 46/93 (49.46%), Postives = 73/93 (78.49%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAE++  ED++ K+K++A+NALE Y YNM+N V D +K+  KL+  +K+KIE A  +A++WLD NQ +E +E+++K+KE+E++CNPII  +YQ
Sbjct:  552 EAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22
Identity = 45/93 (48.39%), Postives = 73/93 (78.49%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAE++  ED++ K++++A+N+LE Y YNM+N + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++E+K+KE+E+ICNPII  +YQ
Sbjct:  177 EAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQ 269          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22
Identity = 46/93 (49.46%), Postives = 73/93 (78.49%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAE++  ED++ K+K++A+NALE Y YNM+N V D +K+  KL+  +K+KIE A  +A++WLD NQ +E +E+++K+KE+E++CNPII  +YQ
Sbjct:  552 EAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22
Identity = 44/92 (47.83%), Postives = 69/92 (75.00%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEKY+ EDE+ K+ + AKN LE+Y +NM+ T+ ++ + +K+  +D+  I D  ++ I+WLD+NQLA+ +E+E + KELE +CNPII K+YQ
Sbjct:  521 EAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQ 612          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22
Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 275
            EAEKYKAEDE    +++AKN LE+YAY+++NT+ + K+  ++   DKKKIED I + I WLD+NQ AE DE+E + KELE+I NPI+   Y
Sbjct:  389 EAEKYKAEDEAEASRIQAKNGLESYAYSLKNTITEGKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAY 477          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22
Identity = 45/92 (48.91%), Postives = 70/92 (76.09%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            +AEK+K +D++ K+++E+KN LENY ++++N++ D+KI SKL  +DK  IE   +  ++WL+SNQ AE DEF  K+ +LESI NPI++K YQ
Sbjct:  522 DAEKFKEQDQQQKERIESKNNLENYIFSVKNSINDQKIISKLSKSDKNIIESETESTLKWLESNQSAEKDEFNQKISDLESIVNPILSKFYQ 613          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22
Identity = 44/93 (47.31%), Postives = 73/93 (78.49%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++++K+KE+E++CNPII  +YQ
Sbjct:  553 EAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22
Identity = 44/93 (47.31%), Postives = 73/93 (78.49%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAE++  ED++ K++++A+N+LE Y YNM+N + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++E+K+KE+E++CNPII  +YQ
Sbjct:  177 EAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 269          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 5.497e-22
Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 278
            EAEK+K EDE+   +V+AKN LE+YAY+++NT+ +E+  SKLD ++ +++  A D+ I WLDSNQ A  +EF D+ KELES  NPI+ K YQ
Sbjct:  519 EAEKFKEEDEKEASRVQAKNQLESYAYSLKNTLGEEQFKSKLDASEIEEVTKAADETIAWLDSNQTATQEEFADQQKELESKANPIMTKAYQ 610          
BLAST of DR908850 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.497e-22
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 3
Query:    3 EAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 275
            +AEKYKAEDE    +++AKN LE+YAY+++NT+ + ++  ++   DKKK+ D ID+ I WLD+NQ AE DE+E + KELE + NPII+  Y
Sbjct:  519 DAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAY 607          
The following BLAST results are available for this feature:
BLAST of DR908850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
BIP2_ARATH1.889e-2249.46Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_TOBAC1.889e-2248.39Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
BIP1_ARATH1.889e-2249.46Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
HSP7D_DROME2.467e-2247.83Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP70_PENCI2.467e-2253.85Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HS7C3_DICDI2.467e-2248.91Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
BIP5_TOBAC2.467e-2247.31Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP2_TOBAC2.467e-2247.31Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]
HSP72_CANAL5.497e-2252.17Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_EMENI5.497e-2250.55Heat shock 70 kDa protein OS=Emericella nidulans G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16978 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-38_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908850 ID=DR908850; Name=DR908850; organism=Citrus sinensis; type=EST; length=572bp
AAGAGGCCGAGAAGTACAAGGCTGAAGACGAGGAGCACAAGAAGAAGGTC
GAGGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGT
CAAGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGA
TTGAGGATGCCATTGATCAGGCAATTCAATGGCTTGATAGCAACCAGCTG
GCTGAGGCCGATGAATTTGAAGACAAGATGAAGGAGCTTGAGAGCATCTG
CAATCCCATCATTGCCAAGATGTATCAAGGTGCTGGTGGTGATATGGGCG
GTGGCATGGATGATGATGCTCCTCCAGCTGGTGGCAGTGCCGCCGGTCCC
AAGATTGAGGAAGTTGACTAAGCTTCCAGTTTTATTTTGTTGTGTTTGTG
GGAGGTCGGTTTTTTGACGGTGGGAAAACTGGACGTTTGGTTTTTATCTT
ATGTTGTTTTAGCCTTAGGATGAATATTAATTTTTCCTTTTCTTTTTATT
TTTCAAATTTTACTTTTAATTCGGACCAATTTATATAATGAATATTTTTT
CGGTCCCTAAAAAAAAAAAAAA
back to top