DR908836

Overview
NameDR908836
Unique NameDR908836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAB_BOVIN (Beta-soluble NSF attachment protein OS=Bos taurus GN=NAPB PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.019e-39
Identity = 73/161 (45.34%), Postives = 116/161 (72.05%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 486
            FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEI+E+I   +++N LLKY  K +   A +C
Sbjct:   52 FKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIFEQIGANTMDNPLLKYSAKDYFFKAALC 212          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA_HUMAN (Alpha-soluble NSF attachment protein OS=Homo sapiens GN=NAPA PE=1 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 1.368e-38
Identity = 73/164 (44.51%), Postives = 115/164 (70.12%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 495
            FK+AK+W  AG  + + A  HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   52 FKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAALLEQYQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFC 215          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAB_RAT (Beta-soluble NSF attachment protein OS=Rattus norvegicus GN=Napb PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.198e-38
Identity = 73/161 (45.34%), Postives = 116/161 (72.05%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 486
            FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE + SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C
Sbjct:   52 FKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEE-SNSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALC 211          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA1_ARATH (Alpha-soluble NSF attachment protein 1 OS=Arabidopsis thaliana GN=ASNAP1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.900e-37
Identity = 82/171 (47.95%), Postives = 99/171 (57.89%), Query Frame = 1
Query:    4 SFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAL 516
            S+KLAKSWD+AG  Y+KLA+CHLK  S    A  Y+    C                                  EIAE YES+   EQ I ++E AA+ FQ EEVTTSANQC  KVAQYA++LEQ  + ++     AR SLNN LLKYGVKGHLL AG+C LCK DVV++
Sbjct:  130 SYKLAKSWDQAGIAYLKLADCHLKANS---LANTYMIMDECMDH-------------------------------EIAEYYESDEMFEQAIAYYETAAEFFQIEEVTTSANQCNLKVAQYASQLEQQSRFMKTQ---ARHSLNNKLLKYGVKGHLLTAGMCHLCKADVVSI 263          

HSP 2 Score: 33.113 bits (74), Expect = 3.900e-37
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  513 ITNALERYQDMDPTF 557
            ITNALE+YQD+DPTF
Sbjct:  263 ITNALEKYQDLDPTF 277          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SEC17_COPC7 (Vesicular-fusion protein SEC17 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=SEC17 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25
Identity = 62/170 (36.47%), Postives = 96/170 (56.47%), Query Frame = 1
Query:    4 SFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVV 510
            +FKL K + +AG  + + A C  K +   +A  A+ +AA  YK+   + AI  L+Q +      GR   AA   KEIA++Y  E H++ +    F +A D +  E+ T +ANQC +  A   AELEQ+ ++I +YE +A  SL +NL KY VK + L + +C +  GD+V
Sbjct:   45 AFKLEKQFKEAGDAFAREAECREKCKESLDAGNAWWNAAKAYKRGYPDLAIQALQQTIQHLVAGGRFRQAADREKEIAQIYLQETHDLSRACESFLRAGDWYAEEDATATANQCYKDAADLYAELEQFPQAITLYERVADHSLTSNLTKYSVKEYWLKSLLCTVALGDIV 214          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SEC17_PICPG (Vesicular-fusion protein SEC17 OS=Pichia pastoris (strain GS115) GN=SEC17 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23
Identity = 55/169 (32.54%), Postives = 99/169 (58.58%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAA--ELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGD 504
            +++ +  +KAG  + K A+  +K +SK EAA + ++A  CYK  + ++A  CL +AV  F   G+    A +  E+AELYE++  + +  I+ +E+A + ++ +     AN+C  K A  +   E++ + K+ E YE IA++SLNN+L K+ +K +   A +C+L   D
Sbjct:   47 YRIQRKSNKAGHVFEKAADAQIKADSKDEAANSLIEAYKCYKLDAPSDAARCLNKAVEFFALKGQFRRGANFKAELAELYETKMADPKHAILAYEEAGEWYRGDSAEALANKCYVKAADLSCSDEVQDFLKAAESYERIAKESLNNSLAKWSLKDYFFKAILCRLALND 215          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SEC17_SCHPO (Probable vesicular-fusion protein sec17 homolog OS=Schizosaccharomyces pombe GN=sec17 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.344e-22
Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVA 513
            ++L K    AG  + K A   LK + K +AA  YV+A   Y++   +EA   L+ A+ +F   G    AA Y  ++ +++E E  + +  +  +E A + + +++    AN+   K A  A    +Y  +I  +E++AR S+ NNLLK+ VK +LL AG+C +  GD +A
Sbjct:   45 YRLQKQGSAAGYAFEKAAEMQLKTDDKDDAASTYVEAFKSYRREKPSEAARVLQIAIELFTRRGNFRRAANYKMDLGDIFEQELQDTKAALGAYEDAGEWYSSDQADALANKAYLKAADLAGLCGEYSLAIRKFEQVARASVQNNLLKWSVKDYLLKAGLCYMANGDEIA 214          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SEC17_NEUCR (Probable vesicular-fusion protein sec17 homolog OS=Neurospora crassa GN=B1D1.150 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.385e-21
Identity = 58/171 (33.92%), Postives = 96/171 (56.14%), Query Frame = 1
Query:    4 SFKLAKSWDKAGATYVKLANCHL-KLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVV 510
            +F+L KS  +AG  + + A     KL+  ++AA A +DA   Y+K + + A+ C+E A+  +   G    AA + +  AE+YE+E  N  + I  +  AA+ ++N+     AN+   KVA  +A    +  +IE +E++A  SL NNL++Y VK + L AG+C L   D+V
Sbjct:   46 AFRLQKSNTEAGKCFEEAAKIFTEKLKEPNDAANAMLDAFKVYRKDAPDNAVRCVEVAIKQYTMAGNFRRAASHKENQAEVYENELQNKPEAIKAYTTAAEWYENDGAVALANKLWLKVADLSALAGDFFAAIEKFEKVAEASLGNNLMRYSVKEYFLKAGLCSLATKDMV 216          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: V033_FOWPV (Soluble NSF attachment protein homolog FPV033 OS=Fowlpox virus GN=SNAP PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.168e-19
Identity = 53/172 (30.81%), Postives = 95/172 (55.23%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKH-----EAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYES-EHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGD 504
            FK  K+W+ AG +++K A     L+S+      + A  +V+A++ Y+K    ++I CL QA+ ++  I   + AA++   +AE+YES   ++E+  + +E A + ++ E    SAN C  KVA     ++Q+ K+  +YE+I    +   +LK+ +K   L A +C  C GD
Sbjct:   48 FKAVKNWELAGYSFLKAA----VLQSQESDFVLDTAINFVNASNMYRKIDPKKSIECLLQAIEVYKSINNFTTAAKHQMTVAEIYESCIMDLEKACMHYEYATEYYREEGSIKSANDCMIKVADCFTRMKQFDKAASVYEQIGIICMRLPILKHRIKDQFLKAILCHFCIGD 215          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SEC17_YEAST (Alpha-soluble NSF attachment protein OS=Saccharomyces cerevisiae GN=SEC17 PE=1 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17
Identity = 49/171 (28.65%), Postives = 92/171 (53.80%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSN-EAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVA 513
            ++L K  + AG +++K A+   K  ++ EA   YV+A  C+K   ++  A+  LE A+ +F   G+    A +  E+ E+ E++ H+  + I  +E A + +  ++    +N+C  K A   A   QY ++ +IY ++ + S+ N L ++ +K + L  G+CQL   D VA
Sbjct:   47 YRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVA 217          
The following BLAST results are available for this feature:
BLAST of DR908836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SNAB_BOVIN8.019e-3945.34Beta-soluble NSF attachment protein OS=Bos taurus ... [more]
SNAA_HUMAN1.368e-3844.51Alpha-soluble NSF attachment protein OS=Homo sapie... [more]
SNAB_RAT5.198e-3845.34Beta-soluble NSF attachment protein OS=Rattus norv... [more]
SNAA1_ARATH3.900e-3747.95Alpha-soluble NSF attachment protein 1 OS=Arabidop... [more]
SEC17_COPC75.046e-2536.47Vesicular-fusion protein SEC17 OS=Coprinopsis cine... [more]
SEC17_PICPG6.169e-2332.54Vesicular-fusion protein SEC17 OS=Pichia pastoris ... [more]
SEC17_SCHPO2.344e-2231.76Probable vesicular-fusion protein sec17 homolog OS... [more]
SEC17_NEUCR3.385e-2133.92Probable vesicular-fusion protein sec17 homolog OS... [more]
V033_FOWPV3.168e-1930.81Soluble NSF attachment protein homolog FPV033 OS=F... [more]
SEC17_YEAST1.019e-1728.65Alpha-soluble NSF attachment protein OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16964 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-14_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908836 ID=DR908836; Name=DR908836; organism=Citrus sinensis; type=EST; length=559bp
CCGTCCTTCAAGCTCGCCAAATCATGGGATAAAGCTGGAGCAACTTATGT
TAAGTTGGCAAACTGTCATTTAAAGTTGGAAAGCAAACATGAAGCTGCTC
AAGCTTATGTTGATGCTGCCCACTGCTATAAGAAAACATCTTCAAATGAG
GCCATATCTTGCTTAGAACAGGCTGTAAATATGTTTTGTGACATTGGAAG
GCTCAGTATGGCTGCAAGATATTATAAGGAAATTGCTGAGCTGTATGAAT
CTGAGCACAACATTGAACAGACTATTGTTTTCTTTGAGAAGGCAGCTGAT
ATGTTCCAAAATGAAGAAGTAACAACTTCTGCTAACCAGTGCAAGCAGAA
AGTTGCACAATATGCTGCTGAATTGGAACAATATCACAAGTCAATTGAGA
TTTATGAAGAGATTGCTAGGCAGTCTCTCAACAACAACTTGTTGAAATAT
GGAGTGAAAGGACATCTTCTTAATGCTGGCATATGCCAACTTTGCAAGGG
TGATGTTGTTGCATTACCAACGCATTGGAGCGATACCAGGACATGGATCC
TACCTTTTT
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