DR908833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DDX3_DICDI (Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum GN=ddx3 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.182e-30 Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 1 Query: 4 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTR 318 T IHGD TQ ERE AL+SF+S TP LVATD+A+RGL I +V V+NFDLP DI YVHRIGRTGRAGK GLA +FFNE N + L +LM+ SNQ++P W + Sbjct: 532 TCIHGDLTQPERENALQSFRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNKPVGAELLKLMKASNQDIPDWFEK 636
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DBP2_KLULA (ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis GN=DBP2 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.133e-30 Identity = 58/107 (54.21%), Postives = 81/107 (75.70%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRY 321 A IHGD+ Q ER+ L F+SG++PI+VATDVAARG+D+ + +V+N+D+P +I+DYVHRIGRTGRAG +G A +FF E N SL L ++M+E+ Q++P L RY Sbjct: 387 ALAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIKIMREAKQDIPEELRRY 493
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DBP2_CANAL (ATP-dependent RNA helicase DBP2 OS=Candida albicans GN=DBP2 PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.217e-29 Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRA 333 A IHGD+ Q ER+ L F+ GKT I+VATDVAARG+D+ + HV+N+D+P +I+DYVHRIGRTGR G SG A +FF E N L L ++M+E+NQ VP L R+ R+ Sbjct: 401 ALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDRRS 511
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DBP2_YEAST (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae GN=DBP2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.589e-29 Identity = 57/111 (51.35%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRA 333 A IHGD+ Q+ER+ L+ F++G++PI+VATDVAARG+D+ + +V+N+D+P +I+DYVHRIGRTGRAG +G A +FF E N L L +M+E+NQ +P L +Y R+ Sbjct: 387 ALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYDRRS 497
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DBP2_YEAS7 (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.589e-29 Identity = 57/111 (51.35%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRA 333 A IHGD+ Q+ER+ L+ F++G++PI+VATDVAARG+D+ + +V+N+D+P +I+DYVHRIGRTGRAG +G A +FF E N L L +M+E+NQ +P L +Y R+ Sbjct: 387 ALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYDRRS 497
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 7.886e-29 Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLT 315 A IHGD+TQ ER+ L FKSG++PI+ ATDVAARGLD+ + VVN+D PN ++DY+HRIGRTGRAG G+A FF +N AR L +++QE+ Q VP L+ Sbjct: 437 ALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLS 541
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata GN=DBP2 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.030e-28 Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 330 A IHGD+ Q+ER+ L F++G +PI+VATDVAARG+D+ + VVN+D+P +I+DYVHRIGRTGRAG +G A +FF E+N SL L +M+E+ Q +P L +Y R Sbjct: 384 ALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQNIPEELMKYDRR 493
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DBP2_PICST (ATP-dependent RNA helicase DBP2 OS=Pichia stipitis GN=DBP2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.345e-28 Identity = 57/107 (53.27%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRY 321 A IHGD+ Q ER+ LR FK+GK+PI+VATDVAARG+D+ + V+NFD+P +I+DYVHRIGRTGR G +G A +FF + N L L ++M+E+ Q +P L R+ Sbjct: 371 ALAIHGDKQQSERDWVLREFKTGKSPIMVATDVAARGIDVKGINFVINFDMPGNIEDYVHRIGRTGRGGATGTAVSFFTDGNNKLGGDLCKIMREAKQTIPPELQRF 477
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH46_ARATH (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana GN=RH46 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.997e-28 Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 330 A IHGD++Q ER+ L F+SG+TP+LVATDVAARGLD+ + VVN+D PN ++DYVHRIGRTGRAG +GLA FF + + A L ++++ +NQ+VP + A+R Sbjct: 432 AAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATR 541
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DDX17_DROME (ATP-dependent RNA helicase p62 OS=Drosophila melanogaster GN=Rm62 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 8.719e-28 Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 10 IHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 IHGD++Q ER+ LR F+SGK+ ILVATDVAARGLD+ + +V+NFD P + +DY+HRIGRTGR+ G + AFF +NN A+ L ++++E+NQE+ L A + Y Sbjct: 560 IHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSRY 669 The following BLAST results are available for this feature:
BLAST of DR908833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908833 ID=DR908833; Name=DR908833; organism=Citrus sinensis; type=EST; length=573bpback to top |