DR908829

Overview
NameDR908829
Unique NameDR908829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.157e-12
Identity = 35/63 (55.56%), Postives = 39/63 (61.90%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRI 431
            RHYRGVRQRPWGK+AAEIRDP K  ARVWLG                   +G+KA LNFP R+
Sbjct:   37 RHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERV 98          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12
Identity = 36/62 (58.06%), Postives = 38/62 (61.29%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHR 428
            RHYRGVRQRPWGK+AAEIRDP K  ARVWLG                   +GSKA LNFP R
Sbjct:   90 RHYRGVRQRPWGKWAAEIRDPQK-AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPER 150          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11
Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRI 431
            R+YRGVRQRPWGK+AAEIRDP K  ARVWLG                F+ RG KA LNFP  I
Sbjct:   68 RNYRGVRQRPWGKWAAEIRDPNK-AARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHI 129          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 3
Query:  237 GGRH--YRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPH 425
            G  H  YRGVR+RPWGK+AAEIRD  K+G RVWLG                + +RG  A+LNFPH
Sbjct:    9 GAEHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 3
Query:  249 YRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPH 425
            YRGVR+RPWGK+AAEIRD  K+G RVWLG                + +RG  A+LNFPH
Sbjct:   20 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11
Identity = 36/70 (51.43%), Postives = 40/70 (57.14%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPP 452
            R YRGVRQRPWGK+AAEIRDP +  ARVWLG                   RG+KA LNFP  +    PPP
Sbjct:   75 RRYRGVRQRPWGKWAAEIRDPHR-AARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPPPP 143          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11
Identity = 33/60 (55.00%), Postives = 36/60 (60.00%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFP 422
            R YRGVR+RPWGKFAAEIRD  +NG RVWLG                F  +GS A LNFP
Sbjct:   84 RSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFP 143          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11
Identity = 39/79 (49.37%), Postives = 42/79 (53.16%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRI-----GSDEPPPVRVT 464
            R YRGVRQRPWGK+AAEIRDP K  ARVWLG                   RG+KA LNFP  +      S E  PV  T
Sbjct:  183 RRYRGVRQRPWGKWAAEIRDPFK-AARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQT 260          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11
Identity = 34/65 (52.31%), Postives = 38/65 (58.46%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGS 437
            + YRGVRQRPWGK+AAEIRDP K   RVWLG                   RGSKA LNFP  +G+
Sbjct:   59 KKYRGVRQRPWGKWAAEIRDPHK-ATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGT 122          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11
Identity = 31/60 (51.67%), Postives = 37/60 (61.67%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFP 422
            + YRGVR+RPWGKFAAEIRD  + G RVWLG                F ++GS A+LNFP
Sbjct:   80 KSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFP 139          
The following BLAST results are available for this feature:
BLAST of DR908829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
EF113_ARATH5.157e-1255.56Ethylene-responsive transcription factor ERF113 OS... [more]
EF115_ARATH6.735e-1258.06Ethylene-responsive transcription factor ERF115 OS... [more]
EF112_ARATH1.149e-1157.14Ethylene-responsive transcription factor ERF112 OS... [more]
ERF96_ARATH1.500e-1150.77Ethylene-responsive transcription factor ERF096 OS... [more]
ERF97_ARATH1.960e-1152.54Ethylene-responsive transcription factor 14 OS=Ara... [more]
EF110_ARATH2.559e-1151.43Ethylene-responsive transcription factor ERF110 OS... [more]
ERF93_ARATH3.343e-1155.00Ethylene-responsive transcription factor 15 OS=Ara... [more]
ABR1_ARATH5.702e-1149.37Ethylene-responsive transcription factor ABR1 OS=A... [more]
RAP26_ARATH9.726e-1152.31Ethylene-responsive transcription factor RAP2-6 OS... [more]
ERF94_ARATH9.726e-1151.67Ethylene-responsive transcription factor ERF094 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16957 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-40_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908829 ID=DR908829; Name=DR908829; organism=Citrus sinensis; type=EST; length=574bp
CAAGCTCCAATAAAAATGATGGTCTCGTGATCAGTTCTTGTTTAACAGAG
AACTGGGGAGACTTGCCGTTAAGAGTTAACGACTCCGAGGACATGATCAT
CTTCAACTACCTCTATGACGCCGTCAACTCAGGCTGGTCTCCGTTAGATT
CAACGGCAACGTCTAGCGTAAAAGCCGAGTCAGTAAGTGATAATTACAAA
AATAATAATAATATCAATAATCAGAAGATGTGTAGAGGAGGGAGGCACTA
TAGAGGAGTGAGGCAGAGGCCATGGGGTAAGTTCGCGGCTGAGATAAGGG
ACCCAGCTAAGAATGGAGCTAGGGTTTGGCTTGGAACTTACGAGACGGCT
GAGGAAGCTGCTCTGGCTTATGATCGAGCCGCTTTTGATATCCGTGGCTC
GAAGGCTCTGCTTAATTTTCCCCACAGGATTGGCTCCGACGAGCCTCCGC
CAGTCAGAGTTACGGCTAAGCGAAGTCATTCGGCTGACTCGGCGGCTGCG
GCTAAGAGGAGAAAAGATTCAGCGGCGGCTAAGGAGCATCAATTGACCAT
GCTGCCAGCTGGCGAGCACTTATT
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