CN189658

Overview
NameCN189658
Unique NameCN189658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_XANP2 (Acetyl-coenzyme A synthetase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=acsA PE=3 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.200e-95
Identity = 164/243 (67.49%), Postives = 190/243 (78.19%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SR SLR+LGSVGEPINP AW W++ VVG+ RCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGV P +VD +G  +EG C G L I  SWPG  RT+YGDHER+E TYF  +PG YFTGDGC RD DG++W+TGRVDDVINVSGHR+GTAEVESALV+HP+             KGQGIYA+VTL++G   +EELRK LV  VR++IG  A+PD I +APGLPKTRSGKIM+RILRKI
Sbjct:  374 SRSSLRLLGSVGEPINPEAWEWYYRVVGEERCPIVDTWWQTETGGILITPLPGATKLKPGSATRPFFGVMPEVVDAEGKVLEGACEGNLVIADSWPGQMRTVYGDHERFEQTYFSTYPGKYFTGDGCRRDADGFYWITGRVDDVINVSGHRMGTAEVESALVAHPKVSEAAVVGFPHDIKGQGIYAYVTLMDGEEPTEELRKELVGWVRREIGPIASPDLIQFAPGLPKTRSGKIMRRILRKI 616          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_SACD2 (Acetyl-coenzyme A synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=acsA PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.493e-95
Identity = 163/242 (67.36%), Postives = 187/242 (77.27%), Query Frame = 3
Query:    9 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            RKSLR+LG+VGEPINP AW W++NVVGD RCPI DTWWQTETGG M+TPLPGA   KPGSAT PFFGV+PV++D +G  IEGE  G L IKSSWPG  RT+YGDH+R   TYF  +PGYYFTGDG  RD DGY+W+TGRVDDV+NVSGHR+GTAEVESALV HP+             KGQGIYA+VTL+ GV   + LRK LV    ++IG  A PD I WAPGLPKTRSGKIM+RILRK+
Sbjct:  374 RKSLRILGTVGEPINPEAWEWYYNVVGDRRCPIMDTWWQTETGGHMLTPLPGAIDLKPGSATLPFFGVEPVLLDGEGNIIEGEGEGSLAIKSSWPGQIRTVYGDHDRLIQTYFSTYPGYYFTGDGARRDADGYYWITGRVDDVLNVSGHRMGTAEVESALVLHPKVAEAAVVGYPHDVKGQGIYAYVTLMTGVEPDDGLRKELVAMCTQEIGPIAKPDLIQWAPGLPKTRSGKIMRRILRKV 615          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_METRJ (Acetyl-coenzyme A synthetase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=acsA PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.493e-95
Identity = 165/243 (67.90%), Postives = 188/243 (77.37%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SR+SLRVLGSVGEPINP AW W++NVVGD RC I DTWWQTETGG +ITPLPGA   KPGSAT PFFGV+P +VD +G  +EG C G LCI  SWPG  RT+YGDHER+E TYF  +PG YFTGDG  RD DGY+W+TGRVDDVINVSGHR+GTAEVES+LV+HP+             KGQGIYA+VTL +G    + LRK LV  VRK IG  A+PD I +APGLPKTRSGKIM+RILRKI
Sbjct:  375 SRQSLRVLGSVGEPINPEAWEWYYNVVGDRRCSIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVKPQMVDAEGKVLEGPCEGNLCIADSWPGQMRTVYGDHERFEQTYFSTYPGKYFTGDGARRDADGYYWITGRVDDVINVSGHRMGTAEVESSLVAHPKVAEAAVVGYPHNVKGQGIYAYVTLNDGEEGDDALRKELVTWVRKDIGPIASPDLIQFAPGLPKTRSGKIMRRILRKI 617          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_BDEBA (Acetyl-coenzyme A synthetase OS=Bdellovibrio bacteriovorus GN=acsA PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.493e-95
Identity = 163/243 (67.08%), Postives = 187/243 (76.95%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SRK+LR+LGSVGEPINP AW W+ +VVG+ RCP+ DTWWQTETGG +ITPLPGA  QKPGSAT PFFGVQP ++  +G EI G   G L I  SWPG  RT+Y +HER+E TYF  +PGYYFTGDGC RD+DGY+W+TGRVDDVINVSGHR+GTAE+ESALV+H +             KGQGIYAFVTL  G   SEELRK L+  VRK+IG  A PD I WAP LPKTRSGKIM+RILRKI
Sbjct:  373 SRKTLRLLGSVGEPINPEAWAWYHDVVGEGRCPVVDTWWQTETGGILITPLPGAIAQKPGSATLPFFGVQPKLLTNEGQEIHGPGEGVLVIADSWPGQMRTVYRNHERFEDTYFSNYPGYYFTGDGCRRDQDGYYWITGRVDDVINVSGHRLGTAEIESALVAHHKVAEAAVVGYPHDIKGQGIYAFVTLKSGETASEELRKELIQTVRKEIGPIATPDLIQWAPRLPKTRSGKIMRRILRKI 615          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_METSB (Acetyl-coenzyme A synthetase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=acsA PE=3 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.327e-94
Identity = 163/243 (67.08%), Postives = 188/243 (77.37%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SRK+LRVLGSVGEPINP AW W++ VVG+ RCPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD  G  +EG CSG L I  SWP   RTL+ DHER+   YF  +PG YFTGDGC RD+DGY+W+TGRVDDVINVSGHR+GTAEVES+LV+H +             KGQGIYA+VTL+ G+  SEELRK LV  VRK IG  A+PD +H+APGLPKTRSGKIM+RILRKI
Sbjct:  374 SRKTLRVLGSVGEPINPEAWEWYYRVVGEERCPIVDTWWQTETGGILISPLPGATALKPGSATQPFFGVQPQVVDAAGEVLEGPCSGNLVIADSWPAQMRTLFNDHERFVQAYFSAYPGKYFTGDGCRRDEDGYYWITGRVDDVINVSGHRLGTAEVESSLVAHIKVAEAAVVGYPHDLKGQGIYAYVTLMTGIEPSEELRKELVSWVRKDIGPIASPDIVHFAPGLPKTRSGKIMRRILRKI 616          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA2_PSEAE (Acetyl-coenzyme A synthetase 2 OS=Pseudomonas aeruginosa GN=acsA2 PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.957e-94
Identity = 163/243 (67.08%), Postives = 188/243 (77.37%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SR SLR+LGSVGEPINP AW W++ VVG+ RCPI DTWWQTETG  +ITPLPGA   KPGSAT PFFGVQPV++DEKG EI+G  SG L IK+SWP   R++YGDH+R   TYFKP+PGYYF+GDG  RD+DGY+W+TGRVDDVINVSGHRIGTAEVESALV H               KGQ IYAFVTL+ G   SE L++ L+  V K+IG+FA PD + WAP LPKTRSGKIM+RILRKI
Sbjct:  373 SRSSLRLLGSVGEPINPEAWEWYYQVVGEKRCPILDTWWQTETGSILITPLPGATALKPGSATRPFFGVQPVLLDEKGKEIDGAGSGVLAIKASWPSQIRSVYGDHQRMIDTYFKPYPGYYFSGDGARRDEDGYYWITGRVDDVINVSGHRIGTAEVESALVLHDAVAEAAVVGCPHDVKGQAIYAFVTLMAGSQPSEALQQELLALVGKEIGSFAKPDHLQWAPSLPKTRSGKIMRRILRKI 615          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_RHILO (Acetyl-coenzyme A synthetase OS=Rhizobium loti GN=acsA PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.862e-94
Identity = 163/243 (67.08%), Postives = 190/243 (78.19%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SRKSLRVLGSVGEPINP AW W+FNVVG+ + PI DTWWQTETGG +ITPLPGA   K GSAT PFFGV+P +VD +G  +EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YFTGDGC RD DGY+W+TGRVDDVINVSGHR+GTAEVESALVSH +             KGQGIY++VTL++G   +E+LRK L+  VRK+IGA A+PDKI +APGLPKTRSGKIM+RILRKI
Sbjct:  377 SRKSLRVLGSVGEPINPEAWEWYFNVVGNGKVPIVDTWWQTETGGILITPLPGATDLKAGSATRPFFGVKPQLVDGEGKVLEGAADGNLCITDSWPGQMRTVYGDHDRFVQTYFSTYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESALVSHDKVSEAAVVGYPHDIKGQGIYSYVTLMKGEEPTEDLRKELIAHVRKEIGAIASPDKIQFAPGLPKTRSGKIMRRILRKI 619          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_BRAJA (Acetyl-coenzyme A synthetase OS=Bradyrhizobium japonicum GN=acsA PE=1 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 8.603e-94
Identity = 163/243 (67.08%), Postives = 188/243 (77.37%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SR SLR+LGSVGEPINP AW W+  VVG+ RCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGV P IVD  G  +EGE +G LC+  +WPG  RT+YGDH R+E TYF  + G YFTGDGC RD DGY+W+TGRVDDVINVSGHR+GTAEVESALV+H +             KGQGIYA+VTL+ GV  +E+LRK LV  VRK+IG  A+PD+I +APGLPKTRSGKIM+RILRKI
Sbjct:  373 SRASLRLLGSVGEPINPEAWEWYHRVVGEDRCPIVDTWWQTETGGILITPLPGATKLKPGSATQPFFGVVPEIVDADGKVLEGETTGNLCLTRAWPGMMRTVYGDHARFEQTYFSTYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESALVAHEKVSEAAVVGFPHDIKGQGIYAYVTLMAGVQPTEDLRKELVTWVRKEIGPIASPDQIQFAPGLPKTRSGKIMRRILRKI 615          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_RHOCA (Acetyl-coenzyme A synthetase OS=Rhodobacter capsulatus GN=acsA PE=3 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.468e-93
Identity = 165/242 (68.18%), Postives = 189/242 (78.10%), Query Frame = 3
Query:   15 SLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEI-EGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SLRVLGSVGEPINP AW W+   VG  +CPI DT+WQTETGG MITPLPGA P KPGSAT PFFGV+PV++D +  V I E EC G LCI  SWPG  RT++GDH+R++ TYF  + GYYFTGDGC RDKDGY+W+TGRVDDVINVSGHR+GTAEVESALV+HPQ             KGQGIYA+VTL+ G+  SE+LRK LV  VR +IG  A+PD I WAPGLPKTRSGKIM+RILRKI
Sbjct:  384 SLRVLGSVGEPINPEAWVWYDKYVGKGKCPIVDTFWQTETGGHMITPLPGATPTKPGSATNPFFGVKPVVLDPQTAVRIGEVECEGVLCISDSWPGQMRTVWGDHDRFQETYFGQYRGYYFTGDGCRRDKDGYYWITGRVDDVINVSGHRMGTAEVESALVAHPQVAEAAVVGYPHDIKGQGIYAYVTLMNGIEPSEDLRKDLVKWVRTEIGPIASPDLIQWAPGLPKTRSGKIMRRILRKI 625          
BLAST of CN189658 vs. ExPASy Swiss-Prot
Match: ACSA_MAGSM (Acetyl-coenzyme A synthetase OS=Magnetococcus sp. (strain MC-1) GN=acsA PE=3 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.503e-93
Identity = 159/243 (65.43%), Postives = 187/243 (76.95%), Query Frame = 3
Query:    6 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCXXXXXXXXXXXXKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMKRILRKI 734
            SR+SLR+LGSVGEPINP AW W+++VVG+ RCPI DTWWQTETGG +ITPLPGA P KPGSAT PFFGV P ++  +G E+EG C G L +   WPG  RT+YGDH+R+  TYF  +PGYYF GDGC RD+DGY+W+TGRVDDVINVSGHR+GTAEVESALV H Q             KGQGIYA+VTL+ GV  S+ L+  LV  VRK+IG  A+ D I +APGLPKTRSGKIM+RILRKI
Sbjct:  373 SRQSLRILGSVGEPINPEAWEWYYHVVGEGRCPIVDTWWQTETGGILITPLPGATPLKPGSATRPFFGVNPKVLSNEGKEMEGPCEGILVLDHPWPGMMRTVYGDHDRFINTYFANYPGYYFCGDGCRRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVLHDQVAEAAVVGMPHEIKGQGIYAYVTLMSGVEPSDALKTELVKLVRKEIGPIASLDVIQFAPGLPKTRSGKIMRRILRKI 615          
The following BLAST results are available for this feature:
BLAST of CN189658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
ACSA_XANP21.200e-9567.49Acetyl-coenzyme A synthetase OS=Xanthobacter autot... [more]
ACSA_SACD23.493e-9567.36Acetyl-coenzyme A synthetase OS=Saccharophagus deg... [more]
ACSA_METRJ3.493e-9567.90Acetyl-coenzyme A synthetase OS=Methylobacterium r... [more]
ACSA_BDEBA3.493e-9567.08Acetyl-coenzyme A synthetase OS=Bdellovibrio bacte... [more]
ACSA_METSB1.327e-9467.08Acetyl-coenzyme A synthetase OS=Methylocella silve... [more]
ACSA2_PSEAE2.957e-9467.08Acetyl-coenzyme A synthetase 2 OS=Pseudomonas aeru... [more]
ACSA_RHILO3.862e-9467.08Acetyl-coenzyme A synthetase OS=Rhizobium loti GN=... [more]
ACSA_BRAJA8.603e-9467.08Acetyl-coenzyme A synthetase OS=Bradyrhizobium jap... [more]
ACSA_RHOCA1.468e-9368.18Acetyl-coenzyme A synthetase OS=Rhodobacter capsul... [more]
ACSA_MAGSM2.503e-9365.43Acetyl-coenzyme A synthetase OS=Magnetococcus sp. ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002D11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189658 ID=CN189658; Name=CN189658; organism=Citrus sinensis; type=EST; length=736bp
GAGGCTCCCGCAAATCCTTACGGGTCTTGGGAAGTGTAGGCGAGCCTATA
AATCCAAGTGCATGGAGGTGGTTTTTCAATGTAGTTGGAGATTCAAGGTG
TCCTATCTCCGACACTTGGTGGCAAACTGAAACTGGTGGCTTCATGATTA
CTCCGTTACCAGGTGCCTGGCCGCAGAAGCCTGGTTCTGCTACGTTTCCT
TTCTTTGGGGTTCAGCCTGTCATAGTAGATGAGAAGGGTGTTGAAATTGA
AGGCGAGTGCAGTGGGTATCTTTGCATAAAAAGCTCATGGCCTGGTGCAT
TTCGGACTCTTTATGGTGATCATGAAAGATACGAAACCACTTACTTTAAG
CCATTCCCAGGATATTATTTCACTGGTGATGGCTGCAGCAGGGACAAGGA
TGGATACCACTGGCTCACCGGACGAGTTGATGATGTCATCAACGTTAGTG
GACATCGCATTGGCACAGCAGAAGTGGAATCTGCTTTAGTTTCTCATCCC
CAATGTGCAGAAGCGGCTGTGGTTGGTGTTGAGCATGAGGTAAAAGGACA
GGGTATATATGCATTTGTTACTCTCGTGGAGGGTGTTCCTTACAGTGAAG
AACTCCGGAAGAGCCTTGTTCTTGCTGTGAGAAAACAGATTGGAGCATTT
GCGGCTCCCGACAAAATCCACTGGGCCCCTGGCCTTCCAAAAACTAGGAG
TGGAAAGATAATGAAGAGAATTCTGAGAAAAATTGC
back to top