DR908781

Overview
NameDR908781
Unique NameDR908781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 2.513e-30
Identity = 58/135 (42.96%), Postives = 87/135 (64.44%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 514
            A +R+ Q+   ++ +P     + PL  NI EW + +RGP  T +EGG YHG++  P E+PFKPPS  ++TPNGRF+  T++CLSI++ HP+ W P+WSV T L  L++FM       LGS++     +R LA++S
Sbjct:   13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFM-VEKGPTLGSIETSDFTKRQLAVQS 146          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.311e-30
Identity = 58/135 (42.96%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 514
            A +R+ Q+   ++ +P     + PL  NI EW + +RGP  T +EGG YHG++  P E+PFKPPS  ++TPNGRF+  T++CLSI++ HP+ W P+WSV T L  L++FM       LGS++     +R LA +S
Sbjct:   13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFM-VEKGPTLGSIETSDFTKRQLAAQS 146          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.629e-29
Identity = 57/135 (42.22%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 514
            A +R+ Q+   ++ +P     + PL  NI EW + +RGP  T +EGG YHG++  P E+PFKPPS  ++TPNGRF+  T++CLSI++ HP+ W P+WSV T L  L++FM       LGS++     ++ LA +S
Sbjct:   13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFM-VEKGPTLGSIETSDFTKKQLAAQS 146          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2J2_DICDI (Ubiquitin-conjugating enzyme E2 J2 OS=Dictyostelium discoideum GN=ube2j2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 65/155 (41.94%), Postives = 91/155 (58.71%), Query Frame = 2
Query:  113 VKRILQEVKEMQSNPS--DDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEI 571
            V R+ +E+  +  N    D F++ P   NI EW + I GP DT + GG YHG+I  P EYP+KPPS ++ TP+GRF   ++IC S+S+ HP+ W P WS  T ++ LI+FM  + NG  GS+   KE R+ LA  S+  A     P   KL  E+
Sbjct:    7 VTRLKKELLALSKNEDIKDIFIAKPSISNILEWHYVIYGPPDTPYHGGYYHGQIIFPVEYPYKPPSILMTTPSGRFVCNSRICTSMSDFHPDTWSPFWSNCTIILGLISFMTEDENG-FGSIVKSKETRKQLA--SQSMAFNLKNPVFVKLFPEL 158          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 2
Query:  113 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKS 514
            +KR+ +E + +   P    ++ P   +I EW + + G   T F GG Y+G+I+ P EYP+KPP   + TPNGRF TQ KICLS+S+ HPE W P WSV + L  L++FM  N +   GS++    E++ LA  S
Sbjct:    7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDN-SPTTGSVNTSVAEKQRLAKSS 139          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC34_ARATH (Ubiquitin carrier protein E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 2
Query:  113 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF-MPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEIHE 577
            +KR+ +E + +   P    ++ P   +I EW + + G   T F GG Y+G+I+ P EYP+KPP   + TPNGRF TQ KICLS+S+ HPE W P WSV + L  L++F M T+P    GS++    E++ LA  S   A    TP  +KL  E  E
Sbjct:    7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP--TTGSVNTTVIEKQRLAKSS--LAFNCKTPAFRKLFPEYVE 158          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC2_MIMIV (Probable ubiquitin-conjugating enzyme E2 L709 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L709 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.270e-17
Identity = 42/140 (30.00%), Postives = 78/140 (55.71%), Query Frame = 2
Query:  116 KRILQEVKEMQSNPSDDF--MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQ--------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALA 505
            KR+++++ +   N   +F     P E++ ++  F ++GP  T FEGG+YHG I+L  ++PF+PP+  ++TP+GRFE +          IC + ++ HPE W    ++ T L   ++ M    +G +G++     + + LA
Sbjct:    6 KRVIKDINDGMKNLKQEFGIYLAPEEDDFYKVHFILQGPEGTPFEGGLYHGMIRLNNDHPFRPPNLHMITPSGRFEAEKYPISPNSRGICTTATSFHPESWTSMNNLETVLKGFVSLMCDPYDGGVGAVKSTDTQVKKLA 145          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.933e-14
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 454
            A KRIL+E+K++Q +P     + P+ E++F WQ  I GP D+ + GG++   I  P +YPFKPP     T   +    +   ICL I     E W P+ ++   L+++ + + T+PN
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.525e-14
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 454
            A KRIL+E+K++Q +P     + P+ E++F WQ  I GP D+ + GG++   I  P +YPFKPP     T   +    +   ICL I     E W P+ ++   L+++ + + T+PN
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.297e-14
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 454
            A KRIL+E+K++Q +P  +  + P+ E++F WQ  I GP ++ + GG++   I  P +YPFKPP  SF     +    +   ICL I     E W P+ ++   L+++ + + T+PN
Sbjct:    2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114          
The following BLAST results are available for this feature:
BLAST of DR908781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
UB2J2_HUMAN2.513e-3042.96Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens... [more]
UB2J2_BOVIN7.311e-3042.96Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus G... [more]
UB2J2_MOUSE1.629e-2942.22Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus... [more]
UB2J2_DICDI4.012e-2841.94Ubiquitin-conjugating enzyme E2 J2 OS=Dictyosteliu... [more]
UBC33_ARATH2.600e-2741.79Probable ubiquitin carrier protein E2 33 OS=Arabid... [more]
UBC34_ARATH3.396e-2741.03Ubiquitin carrier protein E2 34 OS=Arabidopsis tha... [more]
UBC2_MIMIV9.270e-1730.00Probable ubiquitin-conjugating enzyme E2 L709 OS=A... [more]
UBC9_ARATH1.933e-1434.19SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC28_ARATH2.525e-1434.19Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC11_ARATH3.297e-1434.19Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16909 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-04_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908781 ID=DR908781; Name=DR908781; organism=Citrus sinensis; type=EST; length=581bp
TTTTGTCTGCTCGTTCGCATACAAAGTCCTGATAGGACGGTGGACGTGAA
CCGATCGAAATCAGATCTGAAATCCAATGGCGGAAGACAGGTACAATTTG
AAAAATCCTGCGGTGAAGAGAATCCTACAGGAGGTCAAAGAGATGCAATC
AAATCCGTCAGATGATTTCATGAGCCTCCCTCTCGAGGAGAATATATTTG
AATGGCAATTTGCGATCAGGGGACCGGGTGATACTGAATTTGAAGGTGGG
ATTTATCATGGTCGGATTCAGTTGCCTGCGGAATACCCATTCAAGCCTCC
TTCATTTATGCTCTTAACACCAAATGGGCGTTTTGAAACTCAGACCAAAA
TATGCTTAAGCATTTCGAATCATCATCCGGAGCACTGGCAACCATCTTGG
AGTGTGAGGACTGCTCTTGTAGCACTAATTGCTTTCATGCCCACCAATCC
AAATGGTGCTTTGGGCTCACTAGATTATAAGAAGGAAGAGAGGCGTGCTC
TGGCCATCAAATCTCGTGAAGCTGCCCCAAAATTTGGGACTCCTGAACGT
CAAAAACTCATTGATGAGATCCATGAATATA
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