DR908781

Overview
NameDR908781
Unique NameDR908781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12
Identity = 42/162 (25.93%), Postives = 75/162 (46.30%), Query Frame = 2
Query:  122 ILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSISN-----HHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDE 568
            +L E + +  NPS+ F     E N+ EW   ++GP DT +EGG++  +I  P  YP++PP            + P+GR      +C+SI +          W P+  + T L+++I+        +  ++D  K  R+ +  +  E+ P       +K +DE
Sbjct:    6 LLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGR------LCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKSLDE 161          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12
Identity = 43/162 (26.54%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  122 ILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSI-----SNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDE 568
            ++ E + +  NPS++F     E NI EW   +RGP DT +EGG++  ++  P EYP+ PP            + P+GR      +C+SI     +      W P+  + T L+++I+ +      +  ++D  K  R+ +  +  E+ P       +K +DE
Sbjct:    6 LIAEYRHLIENPSENFKISVNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGR------LCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKSLDE 161          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 2
Query:  116 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 454
            K ++ E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +   I+ P +YP+ PP+F  LT   +        +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 2
Query:  116 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 454
            K ++ E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +   I+ P +YP+ PP+F  LT   +        +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 2
Query:  116 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 454
            K ++ E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +   I+ P +YP+ PP+F  LT   +        +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12
Identity = 37/121 (30.58%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 463
            A+KRI +E+ ++Q +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T   +    +   ICL I       W P+ +V   L+++ + +   NP+  L
Sbjct:    2 ALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12
Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 454
            A+KRI +E+ ++  +P     + P+ E++F WQ  I GP D+ + GG++   I  P +YPFKPP     T    PN    +   ICL I     + W P+ ++   L++ I  M T+PN
Sbjct:    2 ALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPN--INSNGSICLDILR---DQWSPALTISKVLLS-ICSMLTDPN 114          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12
Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 454
            A KRI +E+++MQ +P  +  + P+ EE+IF WQ  I GP D+ + GG++   I   ++YPFKPP  +F     +   +++  ICL I     E W P+ +    L+++ + + T+PN
Sbjct:    2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILK---EQWSPAPTTSKVLLSICSLL-TDPN 115          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12
Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 463
            A+KRI +E+ ++Q +P     + P+ +++F WQ  I GP D+ ++GG++   +  P +YPFKPP     T   +    +   ICL I       W P+ +V   L+++ + +   NP+  L
Sbjct:    2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119          
BLAST of DR908781 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12
Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  110 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 463
            A+KRI +E+ ++Q +P     + P+ +++F WQ  I GP D+ ++GG++   +  P +YPFKPP     T   +    +   ICL I       W P+ +V   L+++ + +   NP+  L
Sbjct:    2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119          
The following BLAST results are available for this feature:
BLAST of DR908781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
UBC_ASFK52.363e-1225.93Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC_ASFB72.363e-1226.54Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UB2R2_RABIT2.363e-1232.03Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus ... [more]
UB2R2_MOUSE2.363e-1232.03Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus... [more]
UB2R2_HUMAN2.363e-1232.03Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens... [more]
UB2D4_HUMAN2.363e-1230.58Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]
UBC1_MAGGR3.086e-1233.61Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UBC12_ARATH3.086e-1233.90Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]
UB2D1_MOUSE4.030e-1229.75Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus... [more]
UB2D1_HUMAN4.030e-1229.75Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16909 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-04_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908781 ID=DR908781; Name=DR908781; organism=Citrus sinensis; type=EST; length=581bp
TTTTGTCTGCTCGTTCGCATACAAAGTCCTGATAGGACGGTGGACGTGAA
CCGATCGAAATCAGATCTGAAATCCAATGGCGGAAGACAGGTACAATTTG
AAAAATCCTGCGGTGAAGAGAATCCTACAGGAGGTCAAAGAGATGCAATC
AAATCCGTCAGATGATTTCATGAGCCTCCCTCTCGAGGAGAATATATTTG
AATGGCAATTTGCGATCAGGGGACCGGGTGATACTGAATTTGAAGGTGGG
ATTTATCATGGTCGGATTCAGTTGCCTGCGGAATACCCATTCAAGCCTCC
TTCATTTATGCTCTTAACACCAAATGGGCGTTTTGAAACTCAGACCAAAA
TATGCTTAAGCATTTCGAATCATCATCCGGAGCACTGGCAACCATCTTGG
AGTGTGAGGACTGCTCTTGTAGCACTAATTGCTTTCATGCCCACCAATCC
AAATGGTGCTTTGGGCTCACTAGATTATAAGAAGGAAGAGAGGCGTGCTC
TGGCCATCAAATCTCGTGAAGCTGCCCCAAAATTTGGGACTCCTGAACGT
CAAAAACTCATTGATGAGATCCATGAATATA
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