CN189562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189562 vs. ExPASy Swiss-Prot
Match: SUI1_YEAST (Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces cerevisiae GN=SUI1 PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.142e-15 Identity = 25/50 (50.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 280 KREFRSNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 429 K++F NG +V+DPE+G++IQLQGDQR V F++ ++K++IK+HGF Sbjct: 59 KKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108 HSP 2 Score: 42.743 bits (99), Expect = 1.142e-15 Identity = 17/28 (60.71%), Postives = 24/28 (85.71%), Query Frame = -1 Query: 459 SKEYAHIRVQQRNGRKSLTSVQGLKKEF 542 + Y HIR+QQRNGRK+LT+VQG+ +E+ Sbjct: 22 TSNYIHIRIQQRNGRKTLTTVQGVPEEY 49
BLAST of CN189562 vs. ExPASy Swiss-Prot
Match: EIF1_CHICK (Eukaryotic translation initiation factor 1 (Fragment) OS=Gallus gallus GN=EIF1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.261e-15 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = -3 Query: 280 KSSRTSKREFRSNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 447 K + K++F NGTV++ PE G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 24 KLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 79 HSP 2 Score: 31.9574 bits (71), Expect = 3.261e-15 Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = -1 Query: 459 VQQRNGRKSLTSVQGLKKEF 518 +QQRNGRK+LT+VQG+ ++ Sbjct: 1 IQQRNGRKTLTTVQGIADDY 20
BLAST of CN189562 vs. ExPASy Swiss-Prot
Match: SUI1_ASHGO (Protein translation factor SUI1 OS=Ashbya gossypii GN=SUI1A PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 5.511e-15 Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = -3 Query: 280 KREFRSNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 429 +++F NG +V+D E+G++IQLQGDQR V FL+ + K++IK+HGF Sbjct: 59 RKDFGCNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108 HSP 2 Score: 44.2838 bits (103), Expect = 5.511e-15 Identity = 18/28 (64.29%), Postives = 24/28 (85.71%), Query Frame = -1 Query: 459 SKEYAHIRVQQRNGRKSLTSVQGLKKEF 542 S Y HIR+QQRNGRK+LT+VQG+ +E+ Sbjct: 22 SSNYIHIRIQQRNGRKTLTTVQGIPEEY 49 The following BLAST results are available for this feature:
BLAST of CN189562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189562 ID=CN189562; Name=CN189562; organism=Citrus sinensis; type=EST; length=542bpback to top |