DR908736

Overview
NameDR908736
Unique NameDR908736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_EMENI (1,4-alpha-glucan-branching enzyme OS=Emericella nidulans GN=be1 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21
Identity = 45/107 (42.06%), Postives = 73/107 (68.22%), Query Frame = 2
Query:    5 KYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            KYG++ +   Y+S K +GD+V+VFER +L+++FNFH   S++DYRVG  + G Y++VLD+D   FGG  R+D    +F+++  ++ R +   VY P+RTA+  AL +
Sbjct:  578 KYGWLHAPQAYISLKHEGDKVLVFERADLLWIFNFHPTESFTDYRVGVEQAGTYRVVLDTDDQAFGGLGRIDQGTRFFTTDMEWNGRRNYLQVYIPTRTALALALEE 684          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_DEBHA (1,4-alpha-glucan-branching enzyme OS=Debaryomyces hansenii GN=GLC3 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21
Identity = 48/115 (41.74%), Postives = 75/115 (65.22%), Query Frame = 2
Query:    5 KYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLD-------HNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALADE 328
            KYG + S   YVS K++ D+VIVFER  L+F+FNFH  +SY+DY++G   PG Y+IVL+SD   FGG+ R++          ++F++   ++DR ++   Y PSRTA+V  + ++
Sbjct:  595 KYGILLSSQAYVSLKNENDKVIVFERNGLLFIFNFHPTNSYADYKIGVETPGVYQIVLNSDSLSFGGHGRIEETNKETGEKLQFFTNNERWNDRSNALFCYIPSRTAIVLQVKEK 709          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_DICDI (1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum GN=glgB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.300e-21
Identity = 45/108 (41.67%), Postives = 74/108 (68.52%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            +++ +++S+  Y+S K + D++IVFER +L+F+FNFH + S+SDYR+G   PGK+  VLDSD   FGG+ R+  +  +++ +  + DR +S L+Y PSRT +V    D
Sbjct:  571 QEFRWLSSDFAYISLKHEDDKIIVFERASLIFIFNFHPSKSFSDYRIGSGVPGKFINVLDSDRKEFGGHVRIGKDNYHYTEDKPWHDRKYSLLIYIPSRTCLVLKKVD 678          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_KLULA (1,4-alpha-glucan-branching enzyme OS=Kluyveromyces lactis GN=GLC3 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 46/107 (42.99%), Postives = 75/107 (70.09%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHN-AEYFSSEGWYDDRPHSFLVYAPSRTAVVYAL 319
            + Y ++ +   YVS K + D+VI FER  L+F+FNFH   S++DYR+G  +PG Y+IVL+SD   +GG+ R+D + ++YF+++  +++R +   VY P+RTA+V AL
Sbjct:  605 KNYKWLNTPQAYVSLKHEVDKVIAFERNGLLFIFNFHPTESFTDYRIGVNEPGCYRIVLNSDKHEYGGWDRIDESQSKYFTTDLKWNERNNFIQVYIPNRTALVLAL 711          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_SOLTU (1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18
Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSS 244
            EK+ F+ S  Q VS  D  ++V+VFERG+LVFVFNFH  ++Y  Y+VGC  PGKY++ LDSD   FGG+ R  H+ ++F+S
Sbjct:  664 EKFSFLASGKQIVSSMDDDNKVVVFERGDLVFVFNFHPKNTYEGYKVGCDLPGKYRVALDSDAWEFGGHGRTGHDVDHFTS 744          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_CANGA (1,4-alpha-glucan-branching enzyme OS=Candida glabrata GN=GLC3 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18
Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 2
Query:    5 KYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVV 310
            K+ ++ +   YVS K + D+VI FER   +FVFNFH   S++DYR+G    G YKIVL++D   FGG+ R+D   E+F+++  +++R +   VY PSRTA+V
Sbjct:  600 KHQWLNTPQAYVSLKHEVDKVIAFERNGHLFVFNFHPTQSFTDYRIGVDVAGTYKIVLNTDRAEFGGHNRIDEAQEFFTTDLEWNNRRNFIQVYIPSRTAIV 701          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_GLOIN (1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.589e-18
Identity = 41/103 (39.81%), Postives = 65/103 (63.11%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVV 310
            E+YG+++S   Y+S K   ++++ FERGNL+++FNF    S++DY++G    GKY I L++D  +FGG+ R+D +  Y S    +D R +   VY P R A V
Sbjct:  577 EQYGWLSSPQAYISLKHNENKLVAFERGNLLWIFNFLPTQSFADYKIGTEWAGKYSIALNTDRKIFGGHDRIDESISYHSQPHEWDGRKNYIQVYIPCRVAPV 679          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_ASHGO (1,4-alpha-glucan-branching enzyme OS=Ashbya gossypii GN=GLC3 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.122e-17
Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    5 KYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRL-DHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYA 316
            K+ ++ +   YVS K + D+VI FER  LVF+FNFH   S++DYR+G  + G Y+I+L+SD   FGG++R+ + N+ + +++  ++ R +   VY PSRTA+V A
Sbjct:  596 KHKWLNTPQAYVSLKHETDKVISFERNGLVFIFNFHPTQSFTDYRIGVDEAGAYRIILNSDREEFGGHRRIEEENSVFHTTDLEWNGRRNFIQVYLPSRTALVLA 700          
The following BLAST results are available for this feature:
BLAST of DR908736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GLGB_EMENI3.726e-2142.061,4-alpha-glucan-branching enzyme OS=Emericella ni... [more]
GLGB_DEBHA3.726e-2141.741,4-alpha-glucan-branching enzyme OS=Debaryomyces ... [more]
GLGB_DICDI8.300e-2141.671,4-alpha-glucan-branching enzyme OS=Dictyostelium... [more]
GLGB_KLULA1.199e-1942.991,4-alpha-glucan-branching enzyme OS=Kluyveromyces... [more]
GLGB_SOLTU1.015e-1851.851,4-alpha-glucan-branching enzyme OS=Solanum tuber... [more]
GLGB_CANGA1.015e-1844.121,4-alpha-glucan-branching enzyme OS=Candida glabr... [more]
GLGB_GLOIN8.589e-1839.811,4-alpha-glucan-branching enzyme OS=Glomus intrar... [more]
GLGB_ASHGO1.122e-1741.901,4-alpha-glucan-branching enzyme OS=Ashbya gossyp... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16864 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-21_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908736 ID=DR908736; Name=DR908736; organism=Citrus sinensis; type=EST; length=586bp
GGAGAAGTACGGGTTCATGACTTCTGAGCACCAATATGTGTCACGGAAGG
ACCAGGGAGACAGGGTAATAGTCTTTGAAAGAGGAAATCTTGTTTTCGTC
TTCAACTTTCATTGGAATAGTAGTTATTCCGACTATCGTGTGGGTTGCTT
GAAACCAGGGAAGTATAAGATTGTCTTGGATTCAGATTATCCACTGTTTG
GAGGCTACAAAAGGCTCGACCACAATGCCGAGTACTTCAGCTCGGAAGGG
TGGTATGATGACCGACCTCATTCCTTCTTGGTATATGCGCCAAGCAGAAC
GGCTGTGGTCTATGCTTTAGCAGATGAAGAAGAGCAACCTCTTAATGTAT
AAAATTAAATAACCATCAGGTTCTATTTAATATGAGAGTTTCGAGAGATC
TCCTTGCTGTGCATCAGCATTCCACTTACCAATCTTGAGAATAAAAGTAC
AGTGAGACTCGTTGAATTTTTGCATCACATAAATTGGGGGAAGTCAGGAT
GAACACGAGGAGAGGACAACATGCATGCTACGTTGCAATTTCATGCGAAG
TATTGGAGACCAATACCGTGTAAAATGTTTCCTGTG
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