CN189470

Overview
NameCN189470
Unique NameCN189470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189470 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.727e-16
Identity = 68/252 (26.98%), Postives = 117/252 (46.43%), Query Frame = 2
Query:   32 TTVCVLDASTYVGFWILKRLLNKGYFVHAAIQNNGEKAIEKQIXXXXXXXXXXXXFNVDVLDYQSILFALKDCCALFCC-----LDSPDGYDDKMVDLEVRGAINVVEACAQTDSIQKLVFSSSLTAAIWREDICSEKDV-DERSWSNQDFCRKLKL--W-YALAKTLSEQAAWALAMDRLLCMVSINAGLVLGPAVTQQNPQSTMFYLK----GAAQMYENGVLAFVDVNFLADVHIRAFEDRSTSGRYFC 748
            TTVCV  A+ ++G W++ RLL +GY V A +++ G     K +            +  D+    S   A++ C  +F        DS D  +++++   + G +N++++C Q  +++K +F++S       E    +K V DE   S+ DF    K+  W Y ++K L+E+A    A +  +  +SI   LV+GP +    P S +  L       A         +V ++ L + HI  FE     GRY C
Sbjct:   18 TTVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTVEGSFDEAIQGCEGVFHLATSMEFDSVDP-ENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTSGGTVNVEE---HQKPVYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSIIKQCQYVHLDDLCEGHIFLFEYPKAEGRYIC 265          
BLAST of CN189470 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16
Identity = 66/249 (26.51%), Postives = 117/249 (46.99%), Query Frame = 2
Query:   38 VCVLDASTYVGFWILKRLLNKGYFVHAAIQNNGEKAIEKQIXXXXXXXXXXXXFNVDVLDYQSILFALKDCCALF-----CCLDSPDGYDDKMVDLEVRGAINVVEACAQTDSIQKLVFSSSLTAAIWREDICSEKDVDERSWSNQDFCRKLKL--W-YALAKTLSEQAAWALAMDRLLCMVSINAGLVLGPAVTQQNPQSTMFYLK----GAAQMYENGVLAFVDVNFLADVHIRAFEDRSTSGRYFC 748
            V V  AS +VG W++ +LL  GY V A +++       K +            +  D+ +  S   A+  C  +F        DS D  +++++   V G ++++ AC +  +++++VF+SS  +    E        D+ +WS+ D+CR++K+  W Y ++K L+E+AA   A +  L  +SI   LV+GP ++   P S +  L       A       +  V ++ L D     FE    +GRY C
Sbjct:    8 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDP-ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEER--PRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYIC 253          
BLAST of CN189470 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.406e-14
Identity = 50/191 (26.18%), Postives = 98/191 (51.31%), Query Frame = 2
Query:   68 GFWILKRLLNKGYFVHAAIQNNGEKAIEKQIXXXXXXXXXXXXFNVDVLDYQSILFALKDCCALFCCLDSPD----GYDDKMVDLEVRGAINVVEACAQTDSIQKLVFSSSLTAAIWREDICSEKDV-DERSWSNQDFCRKLKL--W-YALAKTLSEQAAWALAMDRLLCMVSINAGLVLGPAVTQQNPQS 616
            G W++ RL+  GY V A +++         +            +  D+ +  S   A+K C  +F      D      +++M+   ++G +++++AC +  ++++L+++SS       ED   +K + DE  WS+ +FCR++K+  W Y ++KTL+EQ AW  A +  + +++I   LV+GP +    P S
Sbjct:    1 GSWLVMRLMEPGYMVRATVRDPENLKKVSPLLELPGAKSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFESKDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGTLNVTED---QKPLWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIPTMPPS 188          
BLAST of CN189470 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.001e-14
Identity = 61/256 (23.83%), Postives = 119/256 (46.48%), Query Frame = 2
Query:   41 CVLDASTYVGFWILKRLLNKGYFVHAAIQN-NGEKAIEKQIXXXXXXXXXXXXFNVDVLDYQSILFALKDCCALFCC-----LDSPDGYDDKMVDLEVRGAINVVEACAQTDSIQKLVFSSSLTAAIWREDICSEKDVDERSWSNQDFCRKLKLW---YALAKTLSEQAAWALAMDRLLCMVSINAGLVLGPAVTQQNPQSTMF----------YLKGAAQMYE-NGVLAFVDVNFLADVHIRAFEDRSTSGRYFC 748
            CV+  +  +   ++K LL  GY V+  +++   EK I                F  D+ D  S   +   C  +F         S D   D M+   ++G INV+++C ++ S+++++++SS  A        +   ++E +W++ +F  + K +   Y ++K L+E+ AW  A +  + +V++   L+ G ++    P S             ++ G  +M + +G ++FV V+ LA  H+   E  + SGRY C
Sbjct:   14 CVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAH--LRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKD-MIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYIC 266          
The following BLAST results are available for this feature:
BLAST of CN189470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
DFRA_ANTMA5.727e-1626.98Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_HORVU7.480e-1626.51Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_MEDSA2.406e-1426.18Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
BAN_ARATH7.001e-1423.83Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001O15_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189470 ID=CN189470; Name=CN189470; organism=Citrus sinensis; type=EST; length=748bp
GAGGAGAAGAATGGCTCATGAAGAAAAACCAACGACAGTTTGTGTTCTTG
ATGCTTCAACTTATGTTGGTTTTTGGATTCTTAAAAGACTCCTCAACAAA
GGCTACTTTGTTCACGCAGCTATCCAAAATAATGGAGAGAAGGCGATAGA
GAAGCAGATTAAGGAAATGGAGAAAGTGGAGGAGAAACTGGTGTTGTTTA
ATGTCGATGTTTTGGACTACCAAAGCATTCTTTTTGCTTTAAAGGACTGT
TGTGCTTTGTTCTGCTGTTTAGATAGCCCAGATGGCTATGATGATAAAAT
GGTGGATTTGGAAGTGAGAGGAGCAATCAATGTGGTGGAAGCATGTGCAC
AAACTGATAGTATACAGAAGCTAGTCTTCAGTTCTTCTTTAACTGCAGCC
ATCTGGAGAGAGGACATTTGTTCAGAGAAGGATGTTGATGAGAGGTCTTG
GAGTAATCAAGATTTTTGTAGAAAATTGAAGTTATGGTATGCCCTTGCAA
AGACACTATCTGAACAAGCTGCCTGGGCTCTAGCCATGGATCGGCTGCTG
TGCATGGTTTCCATAAATGCCGGTCTAGTTCTCGGGCCAGCTGTCACTCA
ACAGAACCCTCAATCAACAATGTTTTATCTCAAAGGGGCAGCTCAAATGT
ACGAAAACGGGGTCCTGGCATTTGTCGATGTAAACTTCTTAGCTGATGTC
CATATTCGAGCATTTGAGGATCGATCAACAAGTGGTCGATATTTCTGC
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