CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_ASPTN (ATP-dependent RNA helicase dbp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp5 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 72/195 (36.92%), Postives = 110/195 (56.41%), Query Frame = 3 Query: 150 GSQFDARQY--DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED--QRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 GS+ +Y + K+++L + F+ +F+ +GL +L+G+ A F KPS IQ+R + +++ Q+QSGTGKTA F IL +LD Q Q AL+LAPTRELA+QI V++ +G +L + GT+V D R + VVVGTPG V DM++++ + P +++ VLDEAD Sbjct: 49 GSELHEPEYNVEVKLSDLQADPNNPLFS-----VKNFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLSNPPKNLVGQSQSGTGKTAAFVLNILSRLDLSTEQMQKTPQALILAPTRELARQIVGVIQVMGQFLD----NLIIGTAVPADTNNRPARMEASVVVGTPGTVMDMIKKRIMVPAKLQVLVLDEAD 234
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_ASPNC (ATP-dependent RNA helicase dbp5 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp5 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 77/204 (37.75%), Postives = 112/204 (54.90%), Query Frame = 3 Query: 126 DMAGLAPEGSQFDARQY--DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH--VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 D A GS Y + K+++L + F+ +F+ +GL +L+G+ A F KPS IQ+R + P G +++ Q+QSGTGKTA F IL +LD Q Q AL+LAPTRELA+QI V++ +G +L V GT+V D A + VVVGTPG V DM++R+ + + +++ VLDEAD Sbjct: 37 DGAAAQQGGSDLHEPDYTVEVKLSDLQADPNNPLFS-----VKNFEDLGLDPRILQGLSAMNFRKPSKIQERAL-PLLLGNPAKNLVGQSQSGTGKTAAFVLNILSRLDLSSEQLQKTPQALILAPTRELARQIVGVIQVMGQFLD----GLVIGTAVPADTGARPAKMECSVVVGTPGTVMDMIKRRIMIANKLRVLVLDEAD 230
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_LODEL (ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus GN=DBP5 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 64/154 (41.56%), Postives = 93/154 (60.39%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 SF+ +GL+ LL+G+YA F KPS IQ+R + ++I Q+QSGTGKTA F +L ++D + Q + LAPTRELA+Q +V+ +G Y + + V SV Q I V+VGTPG V D++ R+++ +K+FVLDEAD Sbjct: 117 SFEELGLKPELLKGLYAMKFNKPSKIQERALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDESIKAPQCICLAPTRELARQTLEVVETMGKYSNI-TYQLVVPDSVPRGQAI---SAQVLVGTPGIVHDLINRKAINVAKVKVFVLDEAD 266
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: RRP3_CANGA (ATP-dependent rRNA helicase RRP3 OS=Candida glabrata GN=RRP3 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 243 YDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDYIKMFVLDEAD 704 ++SF + L L++ F KP+ IQ R I P G DVI AQ+G+GKTA F IL +L A VLAPTRELAQQI++ +LG +GV+ VGG ++ + R L H+++ TPGR+ D L + +K V+DEAD Sbjct: 72 FESFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILNKLWEDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVMDEAD 226
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: Y1688_STAEQ (Probable DEAD-box ATP-dependent RNA helicase SERP1688 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1688 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 58/153 (37.91%), Postives = 92/153 (60.13%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F +G+ + ++ + A GF++P+ IQ+ I +G D++ QAQ+GTGKT F +++++ G Q+L+LAPTRELA Q+ + +R V+V GG + + L+ G +VVGTPGRV D L R++L+ I +LDEADE Sbjct: 3 NFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPLIEKV-VGQQGVQSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADE 154
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_KLULA (ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis GN=DBP5 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 SF+ +GL E LL+G+YA F+KPS IQ++ + + ++I Q+QSGTGKTA F +L ++D + QA+ L+P RELA+Q +V++ +G + V + +R ++VVGTPG V D++RR+ L IK+FVLDEAD Sbjct: 80 SFEELGLSEELLKGLYAMKFQKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSLTMLTRVDPNVNSTQAICLSPARELARQTLEVIQEMGKFTKTSSQLVVPDSF----ERNKPITANIVVGTPGTVLDLIRRKMLNLGSIKVFVLDEAD 229
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_GIBZE (ATP-dependent RNA helicase DBP5 OS=Gibberella zeae GN=DBP5 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 70/201 (34.83%), Postives = 114/201 (56.72%), Query Frame = 3 Query: 114 QSFADMAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLV-QCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 Q+ ++ L G Q + ++EL + + F ++ ++ +GL+E+LL+G+ + F KPS +Q + + +++ Q+QSGTGKTA F + IL ++D+ Q QAL LAP+RELA+QIE V+ A+G ++ KV A + G R + V+VGTPG V D++RR+ L +++ VLDEAD Sbjct: 36 QADGNIEDLGGSGLQEPEWDVEVSLSELQNNEATPFHSA-----TTWQDLGLREDLLKGLLSLNFLKPSKVQGKSLPLMLSDPPRNMLAQSQSGTGKTAAFVTAILSRVDFSKPDQPQALALAPSRELARQIEGVINAIGRFVENKKVAAAIPGVLPRGEP----VRASVIVGTPGTVMDIIRRRQLDISQLRVLVLDEAD 227
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_ASPCL (ATP-dependent RNA helicase dbp5 OS=Aspergillus clavatus GN=dbp5 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 74/205 (36.10%), Postives = 112/205 (54.63%), Query Frame = 3 Query: 123 ADMAGLAPEGSQFDARQY--DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED--QRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 AD A GS +Y + K+++L + ++ +F+ +GL +L+G+ A F KPS IQ+R + P G +++ Q+QSGTGKTA F L ++D Q Q AL+LAPTRELA+QI V+ +G +L + GT+V D R + + VGTPG V DM++R+ + P+ +K+ VLDEAD Sbjct: 39 ADGASAPLGGSDLREPEYNVEVKLSDLQADPNNPLYS-----VKNFEDLGLDPRILKGLSAMNFRKPSKIQERAL-PLLLGNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQIVGVVSVMGQFLD----GLIIGTAVPADINNRPKRLECSIAVGTPGTVMDMIKRRIMVPNKLKVLVLDEAD 233
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_YEAST (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae GN=DBP5 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 63/154 (40.91%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 SFD +GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F +L +++ QA+ LAP+RELA+Q +V++ +G + + V + ++ Q V+VGTPG V D++RR+ ++ IK+FVLDEAD Sbjct: 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPDSF----EKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEAD 242
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_YEAS7 (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP5 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 63/154 (40.91%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 SFD +GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F +L +++ QA+ LAP+RELA+Q +V++ +G + + V + ++ Q V+VGTPG V D++RR+ ++ IK+FVLDEAD Sbjct: 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPDSF----EKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEAD 242 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |