CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_ASPFU (ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus GN=dbp5 PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 63/159 (39.62%), Postives = 96/159 (60.38%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 +F+ +GL +L+G+ + F KPS IQ+R + +++ Q+QSGTGKTA F L ++D Q Q AL+LAPTRELA+QI V++ +G ++ G+ + A V D R + +VVGTPG V DM++R++ P+ +K+ VLDEAD Sbjct: 78 NFEDLGLDPRILKGLSSMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAV---PTDRDSRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEAD 233
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_ASHGO (ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii GN=DBP5 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 61/154 (39.61%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGI--VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 SF+ +GL LL+G+YA F+KPS IQ+R + + + ++I Q+QSGTGKTA F +L ++D + QA+ LAP+R LA+Q +V++ +G + + V + E + + A H++VGTPG V D++RR+ ++ +K FVLDEAD Sbjct: 80 SFEELGLAPELLKGLYAMKFQKPSKIQERALPLLLYNPPRNMIAQSQSGTGKTAAFSLTMLSRVDVAVPATQAICLAPSR-LARQTLEVIQEMGKFTKIASQLIVPDSY--EKNKAINA--HIIVGTPGTVLDLMRRKMIQLGKVKTFVLDEAD 228
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_CHAGB (ATP-dependent RNA helicase SUB2 OS=Chaetomium globosum GN=SUB2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I G D+I QA+SG GKTA F LQQ++ +C LV+ TRELA QI Y+ +K GGT +++D +L + H++VGTPGR+ ++R + LR ++MFVLDE D+ Sbjct: 57 LKPELLRAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGTPGRLNALVRDKHLRLGNVRMFVLDECDK 207
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX47_DICDI (Probable ATP-dependent RNA helicase ddx47 OS=Dictyostelium discoideum GN=ddx47 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 66/189 (34.92%), Postives = 95/189 (50.26%), Query Frame = 3 Query: 147 EGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDS--FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDYIKMFVLDEAD 704 E S + + + ++ E ++ Q ++ Y++ F+++G+ ++ GF KP IQ+ I KG D+I AQ+G+GKTA F +LQ+L L LAPTRELA QI A+G +GVK VGG L HVVVG+PGRV L + IK F++DEAD Sbjct: 84 EDSLLEKEEEEKEIEEFINNTNQKKSEEEEKKYENVTFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQGLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEAD 272
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_CHAGB (ATP-dependent RNA helicase DBP5 OS=Chaetomium globosum GN=DBP5 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGL-VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 SF+ +GL +++ G+ A F+KPS IQ++ + ++I Q+QSGTGKTA F +L ++D Q QAL+LAP+RELA+QI+ V++ +G + + V A + G+ RE +VVVGTPG V D++RR+ +K+ V+DEAD Sbjct: 73 SFEELGLAKSINDGLLAMNFKKPSKIQEKALPLMLSNPPRNMIAQSQSGTGKTAAFVLTVLSRVDLTKPTQPQALLLAPSRELARQIQSVIQTIGQFCENLNVEAAIPGSISRETG----VRANVVVGTPGTVMDLIRRRQFDVSQLKIMVIDEAD 224
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DRS1_ASHGO (ATP-dependent RNA helicase DRS1 OS=Ashbya gossypii GN=DRS1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 70/224 (31.25%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 126 DMAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDE--------------------------VYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDYIKMFVLDEAD 704 + AG A E + D E + DG +F +E V+ +F+++ L +L+G+ A G+ KPS IQ I G DVI A +G+GKTA F I+++L Y + + LVL PTRELA Q+ V + LG ++ G+ VGG ++R+ ++ L+ +V+ TPGR+ D +R S D +++ V+DEAD Sbjct: 153 EAAGAADESDSESDKDSDNSAEEAVELDGVEFGDEQEEAREEDTAEEMAQFYAPSNEGEEAKNVVHSTFNSLSLSRPVLKGLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVLVLTPTRELAIQVADVGKKLGKFVSGLTFGLAVGGLNLRQQEQALKLRPDIVIATPGRIIDHIRNSASFSVDSVEVLVIDEAD 376
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_NEOFI (ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp5 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 123 ADMAGLAPE---GSQFDARQY--DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 AD AP GS +Y + K+++L + ++ +F+ +GL +L+G+ F KPS IQ+R + +++ Q+QSGTGKTA F L ++D Q Q AL+LAPTRELA+QI V++ +G ++ G+ + A V D R + +VVGTPG V DM++R++ P+ +K+ VLDEAD Sbjct: 36 ADQTDGAPAQLGGSDLHEPEYNVEVKLSDLQADPNNPLYS-----VKNFEDLGLDPRILKGLSNMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAV---PTDRDSRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEAD 233
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_CANAL (ATP-dependent RNA helicase DBP5 OS=Candida albicans GN=DBP5 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 SF+ +GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F +L ++D + Q L L+PTRELA+Q +V+ +G + + V R V+VGTPG D++RR+ L +K+FVLDEAD Sbjct: 151 SFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLTMLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVPNAIPRGS----SVNAQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEAD 300
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_MAGGR (ATP-dependent RNA helicase SUB2 OS=Magnaporthe grisea GN=SUB2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 68/180 (37.78%), Postives = 97/180 (53.89%), Query Frame = 3 Query: 183 KMNELLSTDGQDFFTSYDEVYDS-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 K EL + D SY ++ + F L+ LLR I GFE PS +QQ I G D+I QA+SG GKTA F LQQ++ +C LV+ TRELA QI Y+ +K GGT +++D +L + H++VGTPGR+ ++R + LR +++FVLDE D+ Sbjct: 30 KKGELAAGGNVDKKGSYVGIHSTGFRDFLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDK 209
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: RH52A_ORYSJ (DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica GN=Os06g0602400 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 62/169 (36.69%), Postives = 92/169 (54.44%), Query Frame = 3 Query: 246 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----SGILQQLDYGL------------VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 D F+A GL E +LR + G+E P+ +Q+ + G D++ AQ+G+GKTA FC SG++ G+ + +ALVLAPTRELA QI + + G++V GGT + R L+ G ++V TPGR+ DM+ R + + IK V+DEAD Sbjct: 84 DGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKVSLEAIKYLVMDEAD 252 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |