CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DRS1_USTMA (ATP-dependent RNA helicase DRS1 OS=Ustilago maydis GN=DRS1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 60/176 (34.09%), Postives = 92/176 (52.27%), Query Frame = 3 Query: 201 STDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL-------VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDYIKMFVLDEAD 704 S D S ++ SF A L +LR + + F KP+ IQ R I G D++ A +G+GKTA F +++L + + + L+LAPTRELA Q V +++ + ++ CVGG SV+ + L+ VV+ TPGR+ D +R S D I++ V+DEAD Sbjct: 318 SADSSSKSKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEAD 493
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DEAD_BUCBP (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=deaD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 59/154 (38.31%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 +F + GL ++ + G+ +PS IQ I KG DV+ AQ+G+GKTA F +L + + Q LVL PTRELA Q+ + L GV V A GG + L+ G ++VGTPGR+ D L+R++L + VLDEADE Sbjct: 7 TFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLHNIKLDVRVPQILVLTPTRELAVQVAEAFSNFSKKLIGVHVLALYGGQRYDLQLKSLRKGPQIIVGTPGRLLDHLKRRTLSLSNLHSLVLDEADE 160
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP5_COCIM (ATP-dependent RNA helicase DBP5 OS=Coccidioides immitis GN=DBP5 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 66/198 (33.33%), Postives = 109/198 (55.05%), Query Frame = 3 Query: 126 DMAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQC---QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 D G + S+FD + K+++L + ++ SF+ +GL E + G+ F +PS IQ+R + ++I Q+QSGTGKTA F IL +L+ + QALVLAP+RELA+QI V++A+G ++ A + +QR+ + +VVGTPG V D+++++ ++++ VLDEAD Sbjct: 60 DQRGSELQDSEFDV---NVKLSDLQADPNNPLYS-----IKSFEELGLAEPIQMGLSKMNFRRPSKIQERALPLLMANPPTNMIAQSQSGTGKTAAFVLNILSRLELTPEKQKSPQALVLAPSRELARQIVGVIQAMGTFVEGLFVATAVPMEMNRNQRVEAS---IVVGTPGTVQDLIKKRLFNTQHLRVLVLDEAD 246
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_PICST (ATP-dependent RNA helicase SUB2 OS=Pichia stipitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAG---VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I G DV+ QA+SG GKTA F LQQLD + LV+ TRELA QI Y+ VK GGT ++ D L++ H+VV TPGR+ ++ +++R +K FV+DE D+ Sbjct: 56 LKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPIKRDIEKLKSKDTCPHIVVATPGRLHALVNEKAIRLSNVKSFVIDECDK 206
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_DEBHA (ATP-dependent RNA helicase SUB2 OS=Debaryomyces hansenii GN=SUB2 PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 63/151 (41.72%), Postives = 81/151 (53.64%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQ---AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I G DV+ QA+SG GKTA F LQQLD + LV+ TRELA QI Y+ VK GGT + D L+ H+VV TPGR+ ++ +S+R + IK FV+DE D+ Sbjct: 58 LKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPITRDLEKLKNKDTCPHIVVATPGRLHALVTEKSIRLNNIKSFVIDECDK 208
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 65/180 (36.11%), Postives = 95/180 (52.78%), Query Frame = 3 Query: 177 DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDYIKMFVLDEAD 704 + KM E + + ++ E+ SF M L +LRG+ + GF KP+ IQ + I G DV+ A +G+GKTA F IL++L Y + + ++L PTRELA Q V L + +K VGG S++ + L+ VV+ TPGR D +R S D I++ VLDEAD Sbjct: 271 EAKMKEFFAPEEENQPKKKGEM-SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEAD 449
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 62/156 (39.74%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDYIKMFVLDEAD 704 SF+ + L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F +L Q++ Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I + +V+GTPG V D + + + P IK+FVLDEAD Sbjct: 93 SFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEAD 245
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DD19A_BOVIN (ATP-dependent RNA helicase DDX19A OS=Bos taurus GN=DDX19A PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 61/156 (39.10%), Postives = 91/156 (58.33%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDYIKMFVLDEAD 704 SF+ + L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F +L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I + H+V+GTPG V D + + + P IK+FVLDEAD Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEAD 244
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP10_SCHPO (ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe GN=dbp10 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV--QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 +F +MGL + LLR I+ GF+ P+ IQ++ I +G DV+ A++G+GKTA F +++ L L +AL+L+P RELA Q KV++ ++ A VGG S+ E +L +VV TPGR + L I+ V DEAD Sbjct: 70 NFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEAD 223
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP10_CHAGB (ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum GN=DBP10 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY--GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 F AMGL NLLR I GF P+ IQ++ I + DV+ A++G+GKTA F ++++L V +A++++P+RELA Q KV++ LG +K VGG S+ E ++ A +++ TPGR + SL ++ V DEAD Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIERLKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANPDIIIATPGRFLHLKVEMSLNLSSVRYVVFDEAD 240 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |