CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_NEOFI (ATP-dependent RNA helicase sub2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sub2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ +C LV+ TRELA QI+ YL VK GGT +++D +L ++ ++VVGTPGR+ ++R + L +K FVLDE D+ Sbjct: 65 LKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDK 215
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_ASPFU (ATP-dependent RNA helicase sub2 OS=Aspergillus fumigatus GN=sub2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ +C LV+ TRELA QI+ YL VK GGT +++D +L ++ ++VVGTPGR+ ++R + L +K FVLDE D+ Sbjct: 65 LKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDK 215
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: H669_METJA (Probable ATP-dependent RNA helicase MJ0669 OS=Methanocaldococcus jannaschii GN=MJ0669 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 55/156 (35.26%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 243 YDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG-LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 Y +F+ + L +N+L I GFEKP+ IQ + I F +++ QA++G+GKTA+F +++ ++ +A++L PTRELA Q+ + +L +K+ GG ++ + L+ ++VVGTPGR+ D + R +L +K F+LDEADE Sbjct: 5 YMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNENN-GIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-NANIVVGTPGRILDHINRGTLNLKNVKYFILDEADE 158
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DRS1_GIBZE (ATP-dependent RNA helicase DRS1 OS=Gibberella zeae GN=DRS1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDYIKMFVLDEAD 704 SF M L ++RG+ + GF KP+ IQ + I G DV+ A++G+GKT F IL++L Y + + +VL PTRELA Q V L + +K VGG S++ + L+ V++ TPGR D +R S D +++ VLDEAD Sbjct: 257 SFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFTDIKFTLAVGGLSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEAD 412
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DRS1_CANGA (ATP-dependent RNA helicase DRS1 OS=Candida glabrata GN=DRS1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 61/193 (31.61%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 162 DARQYDTKMNELLSTDGQDFFT-------SYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDYIKMFVLDEAD 704 DA + K+ E + + Q F+ + EV+ +F+ + L +++G+ G+ KPS IQ I G D+I A +G+GKTA F I+++L Y + + +VL PTRELA Q+ V + +G ++ + VGG ++R+ +++L+ +V+ TPGR D +R S D +++ V+DEAD Sbjct: 171 DAGDAEEKVEEDTAEEMQAFYAPESESENAKKEVHKTFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKVASTRVIVLTPTRELAIQVADVGKKIGQFVSNLTFGLAVGGLNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASFNVDSVEVLVIDEAD 363
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DDX27_BOVIN (Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus GN=DDX27 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 61/164 (37.20%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQC---QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDYIKMFVLDEAD 704 + YDE SF M L LL+ I A GF++P+ IQ+ I G D+ A +GTGKTA F +L++L Y Q + LVL PTREL Q+ V + L + + VGG V+ + L+A +++ TPGR+ D L S I++ +LDEAD Sbjct: 181 SQYDENL-SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEAD 343
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBPA_ECOLI (ATP-independent RNA helicase dbpA OS=Escherichia coli (strain K12) GN=dbpA PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 3 Query: 282 LRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 L + G+ + +Q + G DV QA++G+GKTA F G+LQQ+D L Q QALVL PTRELA Q+ +R L +L K+ GG + LQ H++V TPGR+ D L++ ++ D + V+DEAD Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEAD 156
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_ASPOR (ATP-dependent RNA helicase sub2 OS=Aspergillus oryzae GN=sub2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19 Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ +C LV+ TRELA QI+ YL VK GGT +++D +L ++ ++VVGTPGR+ ++R + L +K FVLDE D+ Sbjct: 65 LKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDK 215
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_ASPCL (ATP-dependent RNA helicase sub2 OS=Aspergillus clavatus GN=sub2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19 Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ +C LV+ TRELA QI+ YL VK GGT +++D +L ++ ++VVGTPGR+ ++R + L +K FVLDE D+ Sbjct: 65 LKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDK 215
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: RRP3_SCLS1 (ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19 Identity = 64/163 (39.26%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ---SLRPDYIKMFVLDEAD 704 T +EV SF +G+ ++L G++ P+ IQ+ I +G D+I A++G+GKTA F ILQ L LVLAPTRELA QI + ALG + VK VGG + L H++V TPGR+ D L SLR +K V+DEAD Sbjct: 49 TEEEEVTKSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQSLLDKPQPLFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRS--LKYLVMDEAD 209 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |