CN189435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DRS1_ASPNC (ATP-dependent RNA helicase drs1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=drs1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 62/190 (32.63%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 147 EGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG---LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDYIKMFVLDEAD 704 E SQ DA + + + + + ++ + SF L +LRG+ F P+ IQ++ I G D++ A +G+GKTA F IL++L + + + +L PTRELA Q V L Y + VGG S+RE + IL+ V++ TPGR D +R S D +++ VLDEAD Sbjct: 276 EESQVDAEEEEKRKAFFAPEEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEAD 465
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: YFML_BACSU (Putative ATP-dependent RNA helicase yfmL OS=Bacillus subtilis GN=yfmL PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 47/137 (34.31%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 297 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 A GF+KP+ +Q++ G DVI ++ +GTGKT + +L+++ QA++LAP+REL QI +V++ ++ + +GG +V++ L+ H++VGTPGRVF++++ + L+ +K VLDE D+ Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQ 157
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_YEAS7 (ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae (strain YJM789) GN=SUB2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 69/210 (32.86%), Postives = 101/210 (48.10%), Query Frame = 3 Query: 93 LHFNHHHQSFADMAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDS-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQ---AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L ++ + Q A A E + A T+ + + D SY ++ + F L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA F LQQLD + +V+ RELA QI Y+ VK GGT + +D +L+ H+VV TPGR+ ++R + + ++K FV+DE D+ Sbjct: 10 LEYSDNEQEIQIDASKAAEAGETGAATSATEGDNNNNAAAGDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDK 219
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 70/181 (38.67%), Postives = 96/181 (53.04%), Query Frame = 3 Query: 183 KMNELLSTDGQ-DFFTSYDEVYDS-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL---QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 K EL T G+ D SY ++ + F L+ LLR I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ +C LV+ TRELA QI+ YL VK GGT +++D +L +++VGTPGR+ ++R + L +K FVLDE D+ Sbjct: 36 KDGELTVTGGRADKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDTFPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDK 216
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_ASHGO (ATP-dependent RNA helicase SUB2 OS=Ashbya gossypii GN=SUB2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 60/151 (39.74%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQ---AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA F LQQLD + +VL RELA QI Y+ VK GGT R+D +L+ H+VV TPGR+ ++R ++ ++K FV+DE D+ Sbjct: 61 LKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTDTRKDIELLKNKDTAPHIVVATPGRLKALVRDNNIDLSHVKNFVIDECDK 211
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: MAK5_SCHPO (ATP-dependent RNA helicase mak5 OS=Schizosaccharomyces pombe GN=mak5 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 150 GSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY--IKMFVLDEAD 704 GS+ ++ Y NE + + +D S+ ++ L +L + GF KP IQ I G D+I +A +G+GKT F IL+ + QALV+APTRELA QI + + ++V + GG +V++ QR+L HVVV TPGR++ ++ +L ++ IK VLDEAD Sbjct: 94 GSKVTSKNY----NEFSTLEEEDEHNSHGVDVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEAD 278
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DRS1_CHAGB (ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum GN=DRS1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 249 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDYIKMFVLDEAD 704 SF M L +LRG+ + GF KP+ IQ + I G DV+ A +G+GKTA F IL++L Y + + +VL PTRELA Q V L + +K VGG S++ + L+ VV+ TPGR D +R S + +++ VLDEAD Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEAD 432
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBPA_BACSU (ATP-dependent RNA helicase dbpA OS=Bacillus subtilis GN=dbpA PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 50/147 (34.01%), Postives = 89/147 (60.54%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 + ++LR + G+ +P+ +QQ I + D++ ++Q+G+GKTA+F + + ++ + QAL+L PTRELA Q+++ + +G + +K A G +S + + L+ H+VVGTPGRV D + + +L D + V+DEADE Sbjct: 9 ISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADE 155
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: DBP10_ASPNC (ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp10 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 252 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQA--LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 704 F AMGL NLL+ I GF P+ IQ++ I + DV+ A++G+GKTA F ++Q+L Q A L+L+P+RELA Q KV++ LG +K VGG S+ E ++ +V+ TPGR + +L I+ V DEAD Sbjct: 92 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQKLKSHSTQVGARGLILSPSRELALQTLKVVKELGKGTDLKAVLLVGGDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEAD 244
BLAST of CN189435 vs. ExPASy Swiss-Prot
Match: SUB2_COCIM (ATP-dependent RNA helicase SUB2 OS=Coccidioides immitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19 Identity = 63/151 (41.72%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 267 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAG---VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 707 L+ LLR I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ +C LV+ TRELA QI+ YL VK GGT +++D +L + ++VVGTPGR+ ++R + L IK FVLDE D+ Sbjct: 67 LKPELLRAITDCGFEHPSEVQQVCIPTAILKVDVLCQAKSGLGKTAVFVLTTLNQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIEVLSSKDTYPNIVVGTPGRLNALVREKKLSLRNIKAFVLDECDK 217 The following BLAST results are available for this feature:
BLAST of CN189435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189435 ID=CN189435; Name=CN189435; organism=Citrus sinensis; type=EST; length=709bpback to top |