CN189406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP 502 VG GRIG+L+ R+ F +++ +D + P + G + D +L + D + V+ P T +T G+ DK+ +AK K GV+IVN ARG ++D A+ DA SGH+ DV+ +P D P + +TPH+ +T +AQ R V + + GE P Sbjct: 147 VGLGRIGQLVAARIAAFGAHVIAYDPY-VAPARAAQLGIELMS-FDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEVALADAVRSGHVRAAGLDVFATEPC-TDSPLFELSQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVP 309
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: YGDH_SCHPO (Putative 2-hydroxyacid dehydrogenase C1773.17c OS=Schizosaccharomyces pombe GN=SPBC1773.17c PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18 Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 412 +G G IGK Q++ P C ++YH+R +++ + EK GA F D +L D++ +N PLT T + KMK GV I+N ARGAI++ A + A SG +A DV+ +P P W + PH Sbjct: 165 IGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFVS-FDELLSSSDVISINCPLTPATHDLISTKEFEKMKDGVYIINTARGAIINEDAFIKAIKSGKVARAGLDVFLNEPTPNKF-WLECDKVTIQPH 298
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: GHRB_ENTS8 (Glyoxylate/hydroxypyruvate reductase B OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ghrB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 58/164 (35.37%), Postives = 83/164 (50.61%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 493 VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V V PLT++T M ++ KMKK + +N RG ++D A++ A SG I DV+ +P KD P M N PH+ T + + AA D L G+ Sbjct: 151 VGMGRIGLALAQRAHFGFNMPILYNAR-RHHSEAEERFNARYC-DLDTLLAESDFVCVILPLTDETHHMIGAEQFRKMKKSAIFINAGRGPVVDENALIAALQSGEIHAAGLDVFEQEPLSKDSPLLTMKNVVALPHIGSATHETRYNMAACAVDNLINALNGD 312
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 51/119 (42.86%), Postives = 73/119 (61.34%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 358 +G GRIG+ +L+RLKPF N +YH+R ++ E+E G ++ + L + DIV VN PL T + + + I KMK GV+IVN ARGA++D QA+ DA SG I DV+ +P Sbjct: 169 LGLGRIGRCILERLKPFGFENFIYHNRHQLPS--EEEHGCEYV-GFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKMKDGVVIVNTARGAVIDEQAMTDALRSGKIRSAGLDVFEYEP 284
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: YEAA_SCHPO (Putative 2-hydroxyacid dehydrogenase UNK4.10 OS=Schizosaccharomyces pombe GN=SPACUNK4.10 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ--AMTPHVSGTTIDAQLRYAAGV 460 +G G IGK + +R + F+ ++YH+R + P+ E E GA+F D +L K D++ +N PL TR + K KMK+G++IVN ARGA+MD A+V+A G + DV+ + PK HP + N+ + PH+ +++ Q + V Sbjct: 162 LGLGGIGKTMAKRARAFDMKIVYHNRTPL-PEEEAE-GAEFVS-FDDLLAKSDVLSLNLPLNAHTRHIIGKPEFQKMKRGIVIVNTARGAVMDEAALVEALDEGIVYSAGLDVFEEE--PKIHP-GLLENEKVILLPHLGTNSLETQYKMECAV 309
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 58/175 (33.14%), Postives = 94/175 (53.71%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP--VQNYIVK 523 +G GRIG+ + +R K F +LY+ R + P+ E+E A+F+ L+ +L + D VV+ PLT++T M + + MK ++VN ARG ++DT+A++ A G IAG DV+ +P + + + N + PH+ T A+ A V L + GE P V +VK Sbjct: 156 IGFGRIGQAVARRAKGFGMRILYYSRTRK-PEAEEELKAEFKP-LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFS-LKNVILAPHIGSATFGAREGMAELVARNLIAFKNGEVPPTLVNKEVVK 327
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: GHRB_PECCP (Glyoxylate/hydroxypyruvate reductase B OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ghrB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 54/164 (32.93%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 493 +G GRIG + QR F+ +LY+ R + + E+ A+ DLDT+L + D + + PLT +T + ++++AKMK +++N RGA++D A+ +A G I G DV+ +P P D P +PN PH+ T + + AA D L GE Sbjct: 147 LGMGRIGLAVAQRAHFGFSMPVLYNAR-RHHAEAEQRFNAR-HCDLDTLLAESDFLCITLPLTTETHHLIGREQLAKMKPSAILINIGRGAVVDEDALTEALVKGTIQGAGLDVFVKEPLPVDSPLLDLPNVVALPHIGSATHETRYDMAACAVDNLIAALSGE 308
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: GHRB_SHIFL (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB PE=3 SV=4) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 55/164 (33.54%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 493 VG GRIG L QR+ FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 151 VGMGRIGMALAQRVHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: GHRB_ENT38 (Glyoxylate/hydroxypyruvate reductase B OS=Enterobacter sp. (strain 638) GN=ghrB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 55/163 (33.74%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 490 VG GRIG L QR FN +LY+ R + + E+ A++ E L+T+L + D V + PLT++T + K KMKK + +N RG ++D +A+++A G I DV+ +P P D P M N PH+ T + + AA D L G Sbjct: 151 VGMGRIGLALAQRAHFGFNMPILYNAR-RHHSEAEERFEARYCE-LETLLQEADYVCLILPLTDETHHLIGKAEFEKMKKSAIFINAGRGPVVDEKALIEALQKGEIHAAGLDVFEQEPLPVDSPLLTMSNVVSLPHIGSATHETRYNMAATAVDNLINALNG 311
BLAST of CN189406 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSM (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 55/164 (33.54%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 5 VGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 493 VG GRIG L QR + FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 151 VGMGRIGMALAQRAQFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312 The following BLAST results are available for this feature:
BLAST of CN189406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189406 ID=CN189406; Name=CN189406; organism=Citrus sinensis; type=EST; length=686bpback to top |