CN189395

Overview
NameCN189395
Unique NameCN189395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189395 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26
Identity = 73/176 (41.48%), Postives = 104/176 (59.09%), Query Frame = 2
Query:   95 SDALYQYILETSVYPREPESMKELIELTAKHPWN-IMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDYTLWNGSVVAP 619
            S AL  Y    SV  RE   ++EL ++TA+ P    M    +E QFL +L++LV A+  +EIG +TGYS L  A ALP  G+I+  DI+ +   +G P  Q+AGV   ID R G A   L  L ++    G+FD +FVDADK  YL+Y+++ + LV+ GG++  D TL+ G V  P
Sbjct:    8 SPALLDYA--RSVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGRVADP 180          
BLAST of CN189395 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26
Identity = 62/155 (40.00%), Postives = 99/155 (63.87%), Query Frame = 2
Query:  158 KELIELTAKH-PWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDYTLWNGSVVAP 619
            KELI+ T ++   +IM T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  D  L +G V  P
Sbjct:   36 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 189          
BLAST of CN189395 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25
Identity = 61/155 (39.35%), Postives = 99/155 (63.87%), Query Frame = 2
Query:  158 KELIELTAKH-PWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDYTLWNGSVVAP 619
            KELI+ T ++   +IM T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ +  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  D  L +G V  P
Sbjct:   35 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 188          
The following BLAST results are available for this feature:
BLAST of CN189395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY1.552e-2641.48O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI5.896e-2640.00Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI1.314e-2539.35Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001M16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001M16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189395 ID=CN189395; Name=CN189395; organism=Citrus sinensis; type=EST; length=636bp
GAGGAAAAGATTTGCGTCAATGGCGTCCAACGCAAAAGATCAACAAAACC
AACAAGGCAGACACCAGGAAGTTGGTCACAAGAACCTGCTCCAATCCGAT
GCCCTCTACCAGTATATTCTTGAAACCAGTGTGTACCCAAGAGAGCCTGA
ATCAATGAAGGAGCTTATAGAATTGACTGCCAAACATCCATGGAACATTA
TGACAACGTCGGCAGACGAAGGGCAGTTCTTGAACATGCTGTTGAAGCTG
GTCAATGCAAAGAACACAATGGAGATTGGAGTCTACACAGGCTACTCTCT
TTTGGCCACTGCCCTTGCCCTTCCTGATGACGGCAAGATTTTGGCCATGG
ACATCAACAGAGAAAATTATGAATTGGGGCTGCCAGTTATCCAAAAAGCT
GGTGTTGCTCACAAGATTGACTTCAGAGAAGGCCCTGCCCTGCCTGTTCT
TGACCTGCTGATCCAAGATGAGAAGAACCATGGGTCCTTTGACTTCATAT
TTGTGGACGCTGATAAGGACAACTACCTAAACTACCACAAGAGGTTGATT
GAGTTGGTGAAGGTTGGAGGGGTGATCGGGTACGACTACACCCTATGGAA
CGGATCCGTCGTGGCACCACCTGATGCTCCCCTTAG
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