CN189386

Overview
NameCN189386
Unique NameCN189386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_GIBZE (ATP-dependent RNA helicase FAL1 OS=Gibberella zeae GN=FAL1 PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.009e-71
Identity = 136/221 (61.54%), Postives = 172/221 (77.83%), Query Frame = 2
Query:    5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            +F TS +  V+ TF++M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR+ LR  +I++ VLDEADE+L++GF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVRILVKRDELT
Sbjct:   16 EFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELT 236          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_AJECN (ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.009e-71
Identity = 140/221 (63.35%), Postives = 170/221 (76.92%), Query Frame = 2
Query:    5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            +F TS +  V  TF+ M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   ILQ +D  L E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G HVV GTPGRV DM+RR+ LR  +I++ VLDEADE+L+RGF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVRILVKRDELT
Sbjct:   14 EFTTSKEVTVAPTFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVLRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELT 234          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_SCLS1 (ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.317e-71
Identity = 138/221 (62.44%), Postives = 170/221 (76.92%), Query Frame = 2
Query:    5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            +F TS D  V  TF  M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR++LR  +I++ VLDEADE+L+RGF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVRILVKRDELT
Sbjct:   14 EFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELT 234          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.317e-71
Identity = 138/221 (62.44%), Postives = 170/221 (76.92%), Query Frame = 2
Query:    5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            +F TS D  V  TF  M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR++LR  +I++ VLDEADE+L+RGF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVRILVKRDELT
Sbjct:   14 EFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELT 234          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.934e-71
Identity = 133/217 (61.29%), Postives = 166/217 (76.50%), Query Frame = 2
Query:   14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            T+YD++   FD + L+E LLRGIY YGF  PSAIQQR I+P  +G DV+ QAQSGTGKT TF    LQ++D  +   QAL+LAPTRELA QI+KV+ AL  ++ VKVHAC+GGT  RED   L +G  +VVGTPGRVFDM+ R++ + D+I++F+LDEADEMLS GFK+QIY IF +LPP  QV + SATMP E L++T KFMNKPVRILVK+D LT
Sbjct:   15 TNYDKIVHKFDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQIQKVVMALALHMDVKVHACIGGTDPREDAEALRAGAQIVVGTPGRVFDMIERRNFKTDHIKMFILDEADEMLSSGFKEQIYKIFTMLPPTTQVVLLSATMPKEVLDVTDKFMNKPVRILVKKDALT 231          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_ASPFU (ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus GN=fal1 PE=3 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 3.832e-71
Identity = 137/221 (61.99%), Postives = 171/221 (77.38%), Query Frame = 2
Query:    5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            +F TS +  V  TF+ M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF  GILQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ ED R L  G HVV GTPGRV DM+RR+ LR  +I++ VLDEADE+L+RGF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVR+LVKRDELT
Sbjct:   13 EFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELT 233          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_MAGGR (ATP-dependent RNA helicase FAL1 OS=Magnaporthe grisea GN=FAL1 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.005e-71
Identity = 135/221 (61.09%), Postives = 172/221 (77.83%), Query Frame = 2
Query:    5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            +F TS +  V+ TF++M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR+ LR  +I++ VLDEADE+L++GF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVRILVKRDELT
Sbjct:   16 EFTTSKEVTVHPTFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELT 236          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 6.537e-71
Identity = 132/212 (62.26%), Postives = 167/212 (78.77%), Query Frame = 2
Query:   29 VYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            V+ TF++M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR+ LR  +I++ VLDEADE+L++GF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVRILVKRDELT
Sbjct:   24 VHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELT 235          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 6.537e-71
Identity = 132/212 (62.26%), Postives = 167/212 (78.77%), Query Frame = 2
Query:   29 VYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            V+ TF++M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR+ LR  +I++ VLDEADE+L++GF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVRILVKRDELT
Sbjct:   25 VHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELT 236          
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_ASPCL (ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus GN=fal1 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 8.538e-71
Identity = 136/221 (61.54%), Postives = 170/221 (76.92%), Query Frame = 2
Query:    5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664
            +F TS +  V  TF+ M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   ILQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ ED R L  G HVV GTPGRV DM+RR+ LR  +I++ VLDEADE+L+RGF++QIYD+++ LPP  QV V SAT+P + L++T KFM  PVR+LVKRDELT
Sbjct:   14 EFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELT 234          
The following BLAST results are available for this feature:
BLAST of CN189386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_GIBZE1.009e-7161.54ATP-dependent RNA helicase FAL1 OS=Gibberella zeae... [more]
FAL1_AJECN1.009e-7163.35ATP-dependent RNA helicase FAL1 OS=Ajellomyces cap... [more]
FAL1_SCLS11.317e-7162.44ATP-dependent RNA helicase fal1 OS=Sclerotinia scl... [more]
FAL1_BOTFB1.317e-7162.44ATP-dependent RNA helicase fal1 OS=Botryotinia fuc... [more]
IF4A_ASHGO2.934e-7161.29ATP-dependent RNA helicase eIF4A OS=Ashbya gossypi... [more]
FAL1_ASPFU3.832e-7161.99ATP-dependent RNA helicase fal1 OS=Aspergillus fum... [more]
FAL1_MAGGR5.005e-7161.09ATP-dependent RNA helicase FAL1 OS=Magnaporthe gri... [more]
FAL1_NEUCR6.537e-7162.26ATP-dependent RNA helicase fal-1 OS=Neurospora cra... [more]
FAL1_CHAGB6.537e-7162.26ATP-dependent RNA helicase FAL1 OS=Chaetomium glob... [more]
FAL1_ASPCL8.538e-7161.54ATP-dependent RNA helicase fal1 OS=Aspergillus cla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001M11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189386 ID=CN189386; Name=CN189386; organism=Citrus sinensis; type=EST; length=664bp
GACGGATTTCTTCACATCGTATGATGAGGTTTATGATACTTTTGATGCTA
TGGGATTGCAAGAGAATCTTCTTAGAGGCATTTATGCATATGGTTTTGAG
AAGCCTTCTGCCATTCAGCAAAGGGGGATTGTTCCATTCTGCAAGGGACT
TGATGTAATTCAACAAGCACAGTCTGGAACTGGAAAAACTGCAACTTTTT
GCTCCGGAATTTTGCAGCAGCTTGATTATGGTTTAGTTGAATGCCAAGCA
TTGGTTCTTGCTCCAACTAGGGAACTGGCGCAACAGATTGAGAAGGTTAT
GCGAGCACTTGGTGACTATCTTGGTGTCAAAGTGCATGCATGTGTAGGTG
GAACCAGTGTCCGTGAAGATCAACGCATTCTTTCAAGCGGTGTACATGTT
GTAGTTGGTACACCTGGTCGTGTGTTTGACATGTTGCGGAGGCAATCTCT
TCGCCCAGATAACATCAGGATCTTTGTGCTGGATGAGGCTGATGAAATGC
TGTCACGAGGTTTCAAAGACCAGATCTATGATATCTTCCAGTTGCTACCC
CCAAAGATTCAAGTTGGGGTTTTCTCTGCCACAATGCCACCAGAGGCCCT
TGAAATCACAAGGAAGTTCATGAATAAACCGGTTAGGATTCTGGTGAAAC
GTGATGAGCTTACC
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