DR908680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ARAHI (50S ribosomal protein L2, chloroplastic OS=Arabis hirsuta GN=rpl2-A PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.665e-45 Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 6.092e-45 Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1 Query: 106 TSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 ++TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 SATDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_AETGR (50S ribosomal protein L2, chloroplastic OS=Aethionema grandiflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.957e-45 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT+KLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATIKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_AETCO (50S ribosomal protein L2, chloroplastic OS=Aethionema cordifolium GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.957e-45 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT+KLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATIKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_NUPAD (50S ribosomal protein L2, chloroplastic OS=Nuphar advena GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.039e-44 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_GOSHI (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.039e-44 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_GOSBA (50S ribosomal protein L2, chloroplastic OS=Gossypium barbadense GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.039e-44 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ARATH (50S ribosomal protein L2, chloroplastic OS=Arabidopsis thaliana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.039e-44 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ACOCL (50S ribosomal protein L2, chloroplastic OS=Acorus calamus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.039e-44 Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVGANQ+SLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGANQQSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ACOAM (50S ribosomal protein L2, chloroplastic OS=Acorus americanus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.039e-44 Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVGANQ+SLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGANQQSLGRAGSKCWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of DR908680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908680 ID=DR908680; Name=DR908680; organism=Citrus sinensis; type=EST; length=386bpback to top |