DR908680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_DIOEL (50S ribosomal protein L2, chloroplastic OS=Dioscorea elephantipes GN=rpl2-A PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.773e-44 Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 1 Query: 109 STDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 STDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 STDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 222
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.024e-44 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2B_SOYBN (50S ribosomal protein L2-B, chloroplastic OS=Glycine max GN=rpl2-B PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.024e-44 Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 +DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQK+LGRAGSKCWLGKRPVVRGV Sbjct: 131 SDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.024e-44 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_LOTJA (50S ribosomal protein L2, chloroplastic OS=Lotus japonicus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 3.949e-44 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEIT GKGG+LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITFGKGGKLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_PHAAO (50S ribosomal protein L2, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rpl2-A PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.157e-44 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_LEMMI (50S ribosomal protein L2, chloroplastic OS=Lemna minor GN=rpl2 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.157e-44 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_AMBTC (50S ribosomal protein L2, chloroplastic OS=Amborella trichopoda GN=rpl2-A PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.157e-44 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQK LGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKILGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2B_COFAR (50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica GN=rpl2-B PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.736e-44 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 1 Query: 106 TSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 ++TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 SATDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_TOBAC (50S ribosomal protein L2, chloroplastic OS=Nicotiana tabacum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.149e-43 Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of DR908680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908680 ID=DR908680; Name=DR908680; organism=Citrus sinensis; type=EST; length=386bpback to top |