DR908680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_LARHH (50S ribosomal protein L2 OS=Laribacter hongkongensis (strain HLHK9) GN=rplB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.193e-20 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 1 Query: 115 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 ++P+GT IH IE+ GKG QLAR+AGA L+A+EG A L+L SGE+R + +C ATVG+VGN + + LG+AG+ W G RP VRGV Sbjct: 134 NIPVGTTIHCIEMQPGKGAQLARSAGASVMLLAREGSYAQLRLRSGEIRKVHIDCRATVGEVGNEEHSLRKLGKAGATRWRGIRPTVRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_ERWT9 (50S ribosomal protein L2 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rplB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.193e-20 Identity = 42/89 (47.19%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 115 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 381 ++P+G+ +HN+E+ GKGGQ+AR+AG +++A+EG TL+L SGE+R + +C AT+G+VGN + LG+AG+ W G RP VRG Sbjct: 134 NIPVGSTVHNVEMKPGKGGQIARSAGTYVQIVAREGSYVTLRLRSGEMRKVESDCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRG 222
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_BLOPB (50S ribosomal protein L2 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rplB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.193e-20 Identity = 44/90 (48.89%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 381 +++P+G+ IHN+E+ GKGGQLAR+AG+ +++A++G+ L+L SGE+R I C ATVG+VGN + LG+AG+ W G RP VRG Sbjct: 135 SNIPIGSIIHNVEMKPGKGGQLARSAGSYIQIVARDGEYMILRLRSGEIRKIRCECRATVGEVGNAEHMLRMLGKAGANRWRGNRPTVRG 224
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.193e-20 Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 1 Query: 115 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 +MP+GT IHN+E+ GKGGQ+AR+AGA A+L+ ++ A L+L SGE RL+S +C ATVG V N + G+AG W GKRP VRGV Sbjct: 134 NMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGRDHGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRSRWRGKRPHVRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_ACICJ (50S ribosomal protein L2 OS=Acidiphilium cryptum (strain JF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.193e-20 Identity = 52/117 (44.44%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 40 PYALEEACTVWEGVLIDQKDESTS--TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 P L+ V GV +D K + + +P+GT +HNIE+ G GG+LAR+AG A+L+ K+ A +KL SGE+RLI C A++G V N + + LG+AG K WLG+RP RGV Sbjct: 107 PQRLKVGDQVVAGVKVDVKPGNAMPLSAIPVGTIVHNIELKAGAGGKLARSAGTFAQLVGKDQGYAQVKLMSGELRLIRGECMASIGAVSNPDHSNQQLGKAGRKRWLGRRPHNRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_SHEPW (50S ribosomal protein L2 OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rplB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.783e-20 Identity = 44/90 (48.89%), Postives = 66/90 (73.33%), Query Frame = 1 Query: 115 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 ++P+G+ +H +E+ GKG Q+AR+AGA ++IA++G ATL+L SGE+R + +C AT+G+VGN + LG+AG+K W G RP VRGV Sbjct: 134 NIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIARDGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAGAKRWRGVRPTVRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_SHEHH (50S ribosomal protein L2 OS=Shewanella halifaxensis (strain HAW-EB4) GN=rplB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.783e-20 Identity = 44/90 (48.89%), Postives = 66/90 (73.33%), Query Frame = 1 Query: 115 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 ++P+G+ +H +E+ GKG Q+AR+AGA ++IA++G ATL+L SGE+R + +C AT+G+VGN + LG+AG+K W G RP VRGV Sbjct: 134 NIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIARDGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAGAKRWRGVRPTVRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_SALAI (50S ribosomal protein L2 OS=Salinispora arenicola (strain CNS-205) GN=rplB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.783e-20 Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 1 Query: 115 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 ++P+GT IHN+E+ G G +LAR+AG +L+ +EG ATL++PSGE+R + C A++G++GN + + G+AG W GKRP VRGV Sbjct: 135 NIPVGTTIHNVELRPGGGAKLARSAGVGIQLLGREGAYATLRMPSGEIRRVDVRCRASIGEIGNADQSNINWGKAGRMRWKGKRPTVRGV 224
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_RUTMC (50S ribosomal protein L2 OS=Ruthia magnifica subsp. Calyptogena magnifica GN=rplB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.783e-20 Identity = 53/117 (45.30%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 40 PYALEEACTVWEG--VLIDQKDESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 P+ L T+ G V I + +++PLG +H IE+ KG Q+AR+AGA A+LIAKEG TL+L SGEVR + +C AT+G+V + K LG+AG+ W G RP VRGV Sbjct: 108 PHGLSVGYTIVSGNSVAIQAGNVMPLSNIPLGGVVHCIELKPMKGAQIARSAGAFAQLIAKEGNYVTLRLRSGEVRKVLADCRATIGEVSRSEHSLKKLGKAGATRWRGVRPTVRGV 224
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RL2_RHOPT (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.783e-20 Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 40 PYALEEACTVWEGVLIDQKDESTST--DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 P L TV G +D K + +MP+GT +HN+E+ +GKGGQLAR+AG A+++ ++ L++ SGE RLI C A +G V N S+G+AG K WLG+RP RGV Sbjct: 107 PQRLAVGDTVIAGAYVDVKPGNVMPLGNMPIGTIVHNVELKIGKGGQLARSAGTYAQIVGRDHDYVILRMNSGEQRLIHGRCIAAIGAVSNPDHMNISIGKAGRKRWLGRRPHNRGV 223 The following BLAST results are available for this feature:
BLAST of DR908680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908680 ID=DR908680; Name=DR908680; organism=Citrus sinensis; type=EST; length=386bpback to top |