DR908680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_EUCGG (50S ribosomal protein L2, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.149e-43 Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV NQK LGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVEVNQKKLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_CERDE (50S ribosomal protein L2, chloroplastic OS=Ceratophyllum demersum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.149e-43 Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHN+EITLG+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQK LGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNVEITLGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKRLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_CAPBU (50S ribosomal protein L2, chloroplastic OS=Capsella bursa-pastoris GN=rpl2-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.149e-43 Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2A_COFAR (50S ribosomal protein L2-A, chloroplastic OS=Coffea arabica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.149e-43 Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2A_ATRBE (50S ribosomal protein L2-A, chloroplastic OS=Atropa belladonna GN=rpl2-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.149e-43 Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_HELAN (50S ribosomal protein L2, chloroplastic OS=Helianthus annuus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.560e-43 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQK+LGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_CALFG (50S ribosomal protein L2, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl2 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.560e-43 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ILLOL (50S ribosomal protein L2, chloroplastic OS=Illicium oligandrum GN=rpl2 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.343e-43 Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDM LGTAIHNIEITLGKGGQLARAAG VAKLIAKEGKSATL+LPSGEVRL+SKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 133 TDMSLGTAIHNIEITLGKGGQLARAAGTVAKLIAKEGKSATLRLPSGEVRLVSKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 223
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2B_ATRBE (50S ribosomal protein L2-B, chloroplastic OS=Atropa belladonna GN=rpl2-B PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.366e-43 Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAV KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVPKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_PANGI (50S ribosomal protein L2, chloroplastic OS=Panax ginseng GN=rpl2-A PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.702e-43 Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEIT GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITRGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of DR908680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908680 ID=DR908680; Name=DR908680; organism=Citrus sinensis; type=EST; length=386bpback to top |