DR908680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_NICDE (50S ribosomal protein L2, chloroplastic OS=Nicotiana debneyi GN=rpl2 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.702e-43 Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVR ISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRSISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_DRIGR (50S ribosomal protein L2, chloroplastic OS=Drimys granadensis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.702e-43 Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLI KNC ATVGQVGNVG NQK+LGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLIYKNCLATVGQVGNVGVNQKNLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_SPIOL (50S ribosomal protein L2, chloroplastic OS=Spinacia oleracea GN=rpl2-A PE=1 SV=4) HSP 1 Score: 171.785 bits (434), Expect = 9.726e-43 Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQK LGRAGSK WLGKRPVVRGV Sbjct: 129 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKRLGRAGSKRWLGKRPVVRGV 219
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_IPOPU (50S ribosomal protein L2, chloroplastic OS=Ipomoea purpurea GN=rpl2 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.270e-42 Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 T+MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT+KLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAG+K WLGKRPVVRGV Sbjct: 131 TEMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATIKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_DAUCA (50S ribosomal protein L2, chloroplastic OS=Daucus carota GN=rpl2-A PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.270e-42 Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEIT G+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_PIPCE (50S ribosomal protein L2, chloroplastic OS=Piper cenocladum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.659e-42 Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEITL KGGQLARAAGAV+KLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNV NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLEKGGQLARAAGAVSKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVEVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ORYSJ (50S ribosomal protein L2, chloroplastic OS=Oryza sativa subsp. japonica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.167e-42 Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ORYSI (50S ribosomal protein L2, chloroplastic OS=Oryza sativa subsp. indica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.167e-42 Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ORYSA (50S ribosomal protein L2, chloroplastic OS=Oryza sativa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.167e-42 Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_ORYNI (50S ribosomal protein L2, chloroplastic OS=Oryza nivara GN=rpl2-A PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.167e-42 Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TDMPLGTAIHNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of DR908680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908680 ID=DR908680; Name=DR908680; organism=Citrus sinensis; type=EST; length=386bpback to top |