DR908680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_OENGL (50S ribosomal protein L2, chloroplastic OS=Oenothera glazioviana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.405e-41 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 1 Query: 118 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 MPLGTA+HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 132 MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_OENEH (50S ribosomal protein L2, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl2-A PE=3 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.405e-41 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 1 Query: 118 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 MPLGTA+HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 132 MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_OENBI (50S ribosomal protein L2, chloroplastic OS=Oenothera biennis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.405e-41 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 1 Query: 118 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 MPLGTA+HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 132 MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_OENAR (50S ribosomal protein L2, chloroplastic OS=Oenothera argillicola GN=rpl2-A PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.405e-41 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 1 Query: 118 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 MPLGTA+HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 132 MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_CUSEX (50S ribosomal protein L2, plastid OS=Cuscuta exaltata GN=rpl2 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.834e-41 Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 T+MPLGTAIHN+EIT GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAG++ WLGKRPVVRGV Sbjct: 131 TEMPLGTAIHNLEITRGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAQRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_CUSRE (50S ribosomal protein L2, plastid OS=Cuscuta reflexa GN=rpl2 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.970e-41 Identity = 83/91 (91.21%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 T+MPLGTAIHN+EIT GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK+CSATVGQVGNVG NQKSLGRAG++ WLGKRPVVRGV Sbjct: 131 TEMPLGTAIHNLEITRGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKSCSATVGQVGNVGVNQKSLGRAGAQRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_JASNU (50S ribosomal protein L2, chloroplastic OS=Jasminum nudiflorum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 9.104e-41 Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 T MPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATLKLPSGEVRLIS+NCSATVGQVGNVGA KSLG+AGSK WLGKRPVVRGV Sbjct: 131 THMPLGTAIHNIEITLGKGGQLVRAAGAVAKLIAKEGKSATLKLPSGEVRLISQNCSATVGQVGNVGAKHKSLGKAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_PELHO (50S ribosomal protein L2, chloroplastic OS=Pelargonium hortorum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.028e-40 Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 T++PLGTAIHNIEITLGKGGQLARAAGAVAKLI+KEGKSA +KLPSGEVRLIS+NCSATVGQVGNVG N+KSLGRAGSK WLGKRPVVRGV Sbjct: 131 TNIPLGTAIHNIEITLGKGGQLARAAGAVAKLISKEGKSAAVKLPSGEVRLISQNCSATVGQVGNVGVNRKSLGRAGSKRWLGKRPVVRGV 221
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_CYCTA (50S ribosomal protein L2, chloroplastic OS=Cycas taitungensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.580e-37 Identity = 75/91 (82.42%), Postives = 85/91 (93.41%), Query Frame = 1 Query: 112 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 TD+PLGTAIH+IEITLGKGGQLARAAGAVA+LIAKEG+S TL+LPSGE+RLIS+NCSAT+GQVGNV AN +LG+AGSK WLGKRP VRGV Sbjct: 134 TDVPLGTAIHSIEITLGKGGQLARAAGAVAELIAKEGRSTTLRLPSGEIRLISENCSATIGQVGNVNANNGTLGKAGSKRWLGKRPRVRGV 224
BLAST of DR908680 vs. ExPASy Swiss-Prot
Match: RK2_CUSGR (50S ribosomal protein L2, plastid OS=Cuscuta gronovii GN=rpl2 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.360e-36 Identity = 72/90 (80.00%), Postives = 83/90 (92.22%), Query Frame = 1 Query: 115 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 384 ++PLGT++HN+EIT GKGGQLARAAGA AKLIAKEG+SATLKLPSGE+R ISK CSATVGQVGN+G NQKSLG+AG K WLGKRP+VRG+ Sbjct: 129 EIPLGTSLHNLEITRGKGGQLARAAGAAAKLIAKEGQSATLKLPSGELRFISKQCSATVGQVGNIGVNQKSLGKAGVKRWLGKRPIVRGL 218 The following BLAST results are available for this feature:
BLAST of DR908680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908680 ID=DR908680; Name=DR908680; organism=Citrus sinensis; type=EST; length=386bpback to top |