EY679056

Overview
NameEY679056
Unique NameEY679056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 1.000e-50
Identity = 102/176 (57.95%), Postives = 121/176 (68.75%), Query Frame = 3
Query:   90 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQLA 614
            S   NP V+ D+   GQP GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSMANAGP TNGSQFF+C  KT+WLDGKHVVFG V +GM   +  +  G  + +G TS  + I+DCGQL+
Sbjct:   40 SSSQNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFG--SKSGKTSKKIVITDCGQLS 206          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.707e-50
Identity = 102/176 (57.95%), Postives = 120/176 (68.18%), Query Frame = 3
Query:   90 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQLA 614
            S   NP V+ D+   GQP GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ             SIYGS+F DENF  KH GPG+LSMANAGP TNGSQFF+C  KT+WLDGKHVVFG V +GM   +  +  G  + +G TS  + I+DCGQL+
Sbjct:   40 SSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFG--SKSGKTSKKIVITDCGQLS 206          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.707e-50
Identity = 103/176 (58.52%), Postives = 122/176 (69.32%), Query Frame = 3
Query:   93 KMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAG--PTSPSLISDCGQLA 614
            K    +VFFD+T+GG+ AGRIV EL+ D+ P+TAENFRALCTGEKGVGK GKPLHYKGS+FHRVI  FM Q            ESIYG+KF DENF  KH  P +LSMANAGPGTNGSQFFV    T  LDGKHVVFG+V+ G       ++   L   G  PT  ++I+DCG+L+
Sbjct:    8 KQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVV---RQIENLKTQGDKPTKDAVIADCGELS 180          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.229e-50
Identity = 101/178 (56.74%), Postives = 122/178 (68.54%), Query Frame = 3
Query:   84 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQLA 614
            + S   NP V+ D+   G+P GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSMANAGP TNGSQFF+C  KT+WLDGKHVVFG V +GM   +  +  G  + +G TS  + I+DCGQL+
Sbjct:   39 SSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFG--SKSGRTSKKIVITDCGQLS 207          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.229e-50
Identity = 105/173 (60.69%), Postives = 119/173 (68.79%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQL 611
            M  P+VFFD+   G+  GRIVMEL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIPGFMCQ            +SIYG KFADENF  KHT PGILSMANAG  TNGSQFF+C A T WLDGKHVVFG V QG+   +  +  G  + +G TS  + I+DCGQL
Sbjct:    1 MAKPQVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYG--SDSGKTSKKITIADCGQL 164          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.965e-50
Identity = 102/173 (58.96%), Postives = 120/173 (69.36%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQL 611
            M +P+VFFDM+  GQP GRIVMEL +DV P+TAENFRALCTGEKG G       YKGS FHRVIP FMCQ            +SIYG+KF DENF  KHTGPGIL MANAGP TNGSQFF+  AKT WLD +HVVFG VV+GM   +  +  G  + +G T+  + + DCGQ+
Sbjct:    1 MAHPRVFFDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLG--SQSGKTNKKIAVVDCGQI 164          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.485e-50
Identity = 98/173 (56.65%), Postives = 120/173 (69.36%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQLA 614
            M NP+V+FD+T+G +P GRIV ELF D+ P+TAENFRALCTGEKG GKSGKPL Y+GS FHR+I  FM Q            ESIYG KF DENFV KH  P +LSMANAGPGTNGSQFF+    T  LDGKHVVFG+V++G    +  +    ++   P   ++I+ CG+LA
Sbjct:    1 MSNPRVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDR-PVEDAVIAKCGELA 172          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.469e-50
Identity = 100/168 (59.52%), Postives = 114/168 (67.86%), Query Frame = 3
Query:  108 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            KV+FD+ + G+ AGRIVM LF    P+T ENFRALCTGEKG+GK+GK LHYKGSSFHR+IP FM Q            ESIYG KFADENF  KHTGPG LSMANAG  TNGSQFF+    T WLDG+HVVFG+VV GM       E+ G     P S  +I D G+L
Sbjct:   36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVY-KVEAEGNQSGTPKSKVVIVDSGEL 202          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.218e-49
Identity = 97/169 (57.40%), Postives = 112/169 (66.27%), Query Frame = 3
Query:  105 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            PKVFFD+ V GQ +GR+  +LF+D  P+TAENFRALCTGEKG G SGKPLHYK S FHR+IPGFM Q            ESIYG  F DENF  KH G G+LSMANAGP TNGSQFF+    T WLDG H VFGQ+V G  +     E  G     P++   I+DCG+L
Sbjct:    7 PKVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDG-SKVLDLLEQHGSRSGMPSAKIEITDCGEL 174          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.203e-49
Identity = 95/170 (55.88%), Postives = 118/170 (69.41%), Query Frame = 3
Query:  105 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQLA 614
            P VFFD+ +GGQ AGR+   L++D+ P+TAENFRALCTGEKG+G+SGKPL YKGS+FHRVI GFMCQ            ESIYG KF DE F   H+ P +LSMANAGP TNGSQFF+  + T  LDGKHVVFG+V++G    +  + +       P  P +I+DCGQL+
Sbjct:    5 PIVFFDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVPKEPVVIADCGQLS 174          
The following BLAST results are available for this feature:
BLAST of EY679056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIF_RAT1.000e-5057.95Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIF_MOUSE1.707e-5057.95Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPID_NEUCR1.707e-5058.5241 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIF_HUMAN2.229e-5056.74Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_HEMPU2.229e-5060.69Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPIA_BLAGE4.965e-5058.96Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPID_RHIOR6.485e-5056.65Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
CP20A_ARATH8.469e-5059.52Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
CYP6_RHIOR3.218e-4957.40Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPID_AMAMU4.203e-4955.88Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-F04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679056 ID=EY679056; Name=EY679056; organism=Citrus sinensis; type=EST; length=928bp
GGGCCGGGACCGGGTCCGGATTCCCGGGTCGACCCCGCGTCCGATCAGAA
GTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCC
AAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCA
GGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAAC
TTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCC
TCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGT
GCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATC
TACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCC
CGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCAGT
TCTTCGTCTGTAGGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTG
TTCGGTCAGGTCGTTCAAGGGATGGGACGTCCTCAAGGCCATCAAGAAAG
TGGGGGTCTTGCTCCGGCCGGACCAACAAGCCCGTCCTTGATCTCTGATT
GCGGTCAATTGGCTTAAATTTGATCAGGATAGTGATTGCCTTCTTCTCGA
GGCCGGCTGGATCGCGATCGGGAAGAAGGAATTATGGTATTCTATAATTA
ATGGGGGGGGGGTCGGGAGAATTTTTTAAATCTTTTAACTATTTTTCTCG
CCTTGTGTAAAAATTAAAAATAACTTATAATCATATTAAATGACTACAAA
TGGGGGGGACCCGACCAAAAGGAATCTAAAATGTTAACTAAATGCGGGGT
TTGTGAAAGTTCAATCGCCATTTCTCAAGAGGTACACAAATATTTCGAAA
TTTTGTGAGGGGCACTTTGTTTTTTATA
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