EY679056

Overview
NameEY679056
Unique NameEY679056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.109e-41
Identity = 89/167 (53.29%), Postives = 107/167 (64.07%), Query Frame = 3
Query:  111 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            V+FD++  GQ  G+I  +L+ DV P+TAENFRALCTGEKG G       YKGS FHRVIP FM Q            +SIYG+KFADENFVK+H  PG+LSMANAGP TNGSQFF+      WLDGKHVVFG+V  G+   +   ES G      +   +I + GQL
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVK-KIESFGSGSGATSKKIVIEESGQL 162          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.109e-41
Identity = 90/165 (54.55%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  114 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISD-CG 605
            FFD+   GQP GRIV +LF DV P+TA NFRALCTGEKG G       Y GS+FHRVIP FM Q            +SIYG KF DENF  KH  PG+LSMANAGP TNGSQFF+    T WLDGKHVVFG+V +GM   +  +  G  + +G T   ++ D CG
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLG--SNSGATRARIVIDKCG 160          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.448e-41
Identity = 83/140 (59.29%), Postives = 100/140 (71.43%), Query Frame = 3
Query:  108 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGV--GKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQG 521
            K +FD+++GG+PAGR+V E+++DVTP+TAENF  LC G+ G    K G PL Y+GS FHRVI GFMCQ            ESIYG KF DENF +KH  P +LSMANAGP TNGSQ F+  A T  LDGKHVVFG+V+QG
Sbjct:    6 KTYFDLSIGGKPAGRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVIQG 145          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.891e-41
Identity = 92/175 (52.57%), Postives = 109/175 (62.29%), Query Frame = 3
Query:   90 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQL 611
            SK  NP VFFD+   G+P GRI MELF+++ PRTAENFRALCTGEKG G       +K S FHRVIP F+CQ            +SIYG KF DENF  KHTGPG+LSMAN G  TN SQF +   K E LD KHVVFG V  GM   +  +  G  +P G     + I++CGQ+
Sbjct: 3059 SKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFG--SPKGSVCRRITITECGQI 3224          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.226e-41
Identity = 92/175 (52.57%), Postives = 109/175 (62.29%), Query Frame = 3
Query:   90 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPS-LISDCGQL 611
            SK  NP VFFD+    +P GRI MELF+++ P+TAENFRALCTGEKG G       +K S FHRVIP F+CQ             SIYG KF DENF  KHTGPG+LSMAN G  TN SQFF+   K E LD KHVVFG V  GM   +  +  G  +P G  S   +I++CGQ+
Sbjct:  920 SKETNPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFG--SPKGSVSRRIIITECGQI 1085          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.226e-41
Identity = 81/148 (54.73%), Postives = 101/148 (68.24%), Query Frame = 3
Query:   81 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGM 524
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG+++ G+
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGL 148          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 4.213e-41
Identity = 88/171 (51.46%), Postives = 109/171 (63.74%), Query Frame = 3
Query:  111 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVG-KSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX---ESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            V+FD++  G+P GR+V +L+ DV P+TA NFR+LCTG+KG+  KSGKPL YK S FHRVI  FMCQ               ESIYG KF DENF   H  P +LSMAN+GP TNGSQFF+    T  LDGKHVVFG+V++G    +  + S   A   P     I+DCG+L
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADCGEL 176          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 7.186e-41
Identity = 85/162 (52.47%), Postives = 103/162 (63.58%), Query Frame = 3
Query:  108 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLI 593
            +V+FD+   GQP GR+V +L+ D+ P+TAENFRALCTGEKG G       Y GS FHRVIP FM Q            +SIYG KF DENF K H  PG+LSMANAGP TNGSQFF+      WLDGKHVVFG+VV G    +  +  G  +P+G T   ++
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLG--SPSGATKARIV 155          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 9.386e-41
Identity = 91/171 (53.22%), Postives = 109/171 (63.74%), Query Frame = 3
Query:  102 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            NP VFFD+ +GG P GRI MELFADVTPRTAENFR  CTGE      GKP  YK S FHRVI  FM Q             +IYG+ KFADENFV KH   G+LSMAN+GP TNG QFF+    T +L+GKHVVFGQVV GM   +  + +  +    P+   +I+ CG++
Sbjct:   13 NPIVFFDIALGGVPLGRIKMELFADVTPRTAENFRRFCTGESK-NSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIENTRTIRDK-PSQDVIITQCGEM 181          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.226e-40
Identity = 86/169 (50.89%), Postives = 110/169 (65.09%), Query Frame = 3
Query:  105 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            P VFFD+++G  PAGRI MELF D+TP+TAENFR LCTGE  +  +  P  YK ++FHRVIP FM Q             SIYG++F DENF  KHTGPG+LSMAN+GP TNG QFF+  A  E+LDGKH VFG+V+ G+   +  +     A   P     I++CG++
Sbjct:   13 PIVFFDISIGDTPAGRIKMELFDDITPKTAENFRQLCTGEHRI--NSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENVPTGANNRPKLQVRIAECGEM 179          
The following BLAST results are available for this feature:
BLAST of EY679056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIA_CANAL1.109e-4153.29Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
CYPH_SCHPO1.109e-4154.55Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPID_ASHGO1.448e-4159.29Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
RBP2_HUMAN1.891e-4152.57E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
RBP2_BOVIN3.226e-4152.57E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
PPIH_MOUSE3.226e-4154.73Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPID_CANAL4.213e-4151.46Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
CYPH_YEAST7.186e-4152.47Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPIH_ASPFU9.386e-4153.22Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIH_CRYNE1.226e-4050.89Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-F04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679056 ID=EY679056; Name=EY679056; organism=Citrus sinensis; type=EST; length=928bp
GGGCCGGGACCGGGTCCGGATTCCCGGGTCGACCCCGCGTCCGATCAGAA
GTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCC
AAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCA
GGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAAC
TTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCC
TCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGT
GCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATC
TACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCC
CGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCAGT
TCTTCGTCTGTAGGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTG
TTCGGTCAGGTCGTTCAAGGGATGGGACGTCCTCAAGGCCATCAAGAAAG
TGGGGGTCTTGCTCCGGCCGGACCAACAAGCCCGTCCTTGATCTCTGATT
GCGGTCAATTGGCTTAAATTTGATCAGGATAGTGATTGCCTTCTTCTCGA
GGCCGGCTGGATCGCGATCGGGAAGAAGGAATTATGGTATTCTATAATTA
ATGGGGGGGGGGTCGGGAGAATTTTTTAAATCTTTTAACTATTTTTCTCG
CCTTGTGTAAAAATTAAAAATAACTTATAATCATATTAAATGACTACAAA
TGGGGGGGACCCGACCAAAAGGAATCTAAAATGTTAACTAAATGCGGGGT
TTGTGAAAGTTCAATCGCCATTTCTCAAGAGGTACACAAATATTTCGAAA
TTTTGTGAGGGGCACTTTGTTTTTTATA
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