CN189296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.236e-17 Identity = 66/181 (36.46%), Postives = 102/181 (56.35%), Query Frame = 2 Query: 209 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 742 G+ S + +A +AEFIAT LF++ V + + G + + G+ IA A +FV V A ISGGH+NPAVT GL + +++ +FY V Q LGA A ++ GF+ G+ A + VA G ++ +G+ E++ TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGK----AIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIV 180
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.451e-17 Identity = 65/181 (35.91%), Postives = 99/181 (54.70%), Query Frame = 2 Query: 209 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 742 G+ S + +A +AEFIAT LF++ V + + G + + G+ IA A +FV V A ISGGH+NPAVT GL + +++ LFY + Q LGA ++K F+ G+ G A G ++ +G+ EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 10 GDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHGVA-----GISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIV 180
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.451e-17 Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 2 Query: 206 PGELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 742 PGE RA AEF + +F++ + M G + + + G+ + + +FV V A +SGGH+NPAVT G F+ ++L RA+ Y + Q LGA+ ++K G + A +++G T + + EI+ TF LVYTV+ +A D K+ + I+APL IG V Sbjct: 11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIV 183
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.612e-16 Identity = 65/181 (35.91%), Postives = 100/181 (55.25%), Query Frame = 2 Query: 209 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 742 G+ S + +A +AEFIAT LF++ V + + G + + G+ IA A +FV V A SGGH+NPAVT GL + +++ LFY V Q LGA +++ F+ G+ A + V+ G T+ +G+ EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 10 GDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLR-FVTHGK----AIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIV 181
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.105e-16 Identity = 63/184 (34.24%), Postives = 89/184 (48.37%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 EL+S SF+RA AEF AT +++ +G T + + +A AFG + LV ISG H+NPAVT + ++SL RA YM Q LGA+ GA V+ G LA N + G + G EI T V +F+ D +R+ R V L +GF+ ++LGH Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFS---LTLGH 172
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16 Identity = 61/184 (33.15%), Postives = 90/184 (48.91%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 EL+S SF+RA AEF AT +++ + + + + +A AFG + LV ISG H+NPAVT + ++SL RA+ Y+V Q LGA+ GA V+ G LA N + G + G EI T V +F+ D +R+ R V L +GF+ ++LGH Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFS---LTLGH 172
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.591e-16 Identity = 61/184 (33.15%), Postives = 90/184 (48.91%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 EL+S SF+RA AEF A+ +++ + + + + +A AFG + LV ISG H+NPAVT + ++SL RA+ YMV Q LGA+ GA V+ G LA N + G + G EI T V +F+ D +R+ R V L +GF+ ++LGH Sbjct: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFS---LTLGH 172
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.591e-16 Identity = 58/168 (34.52%), Postives = 83/168 (49.40%), Query Frame = 2 Query: 227 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPI 730 + +R AE I T L + I + GV S + IA FG +I +V C +SG HINPAVT GL + +S+ +A+FY+++QC+GAI G+ ++K A G L +A G T G E TFVL+ V S D +R + P+ L I Sbjct: 24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISEGDV----VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLC--MTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRKNLGNAAPVAVGLAI 185
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 60/184 (32.61%), Postives = 89/184 (48.37%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 EL+S SF+RA AEF AT +++ + + + + + +A AFG + LV ISG H+NPAVT + ++SL RA Y+ Q LGA+ GA V+ G LA N + G + G EI T V +F+ D +R+ R V L +GF+ ++LGH Sbjct: 1 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFS---LTLGH 170
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 62/181 (34.25%), Postives = 97/181 (53.59%), Query Frame = 2 Query: 236 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAV 742 RA +AEF++TF+F++ +++ + K ++T +T G + +A A +F V +SGGH+NPAVT + ++S+ RA++Y V Q +GAI +++ G G + VA G ++ GL EII TF LVY V+S A D KR + + I+APL IG V Sbjct: 24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIV 191 The following BLAST results are available for this feature:
BLAST of CN189296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189296 ID=CN189296; Name=CN189296; organism=Citrus sinensis; type=EST; length=782bpback to top |