CN189295

Overview
NameCN189295
Unique NameCN189295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58
Identity = 106/116 (91.38%), Postives = 112/116 (96.55%), Query Frame = -1
Query:  326 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 673
            VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++NK  GW+DHWIFWVGPF+GA LAALYHQVVIRAIPFK
Sbjct:  172 VAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFK 287          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = -1
Query:  326 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 664
            GYTKGDGLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI+YN+   W+DHWIFWVGPF+GA LAA+YH V+IRA+PFK
Sbjct:  173 GYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFK 285          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.057e-55
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = -1
Query:  329 VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPF 676
            VV  GYTKGDGLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN +  W+DHWIFWVGP +GA LAA+YHQ++IRA+PF
Sbjct:  168 VVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRAMPF 283          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.057e-55
Identity = 101/113 (89.38%), Postives = 107/113 (94.69%), Query Frame = -1
Query:  326 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 664
            GYTKGDGLGAEI+GTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI+YN+   W DHWIFWVGPF+GA LAA+YH VVIRAIPFK
Sbjct:  173 GYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFK 285          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.057e-55
Identity = 101/117 (86.32%), Postives = 109/117 (93.16%), Query Frame = -1
Query:  326 VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 676
            VVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR ARDSHVPILAPLPIGFAVFLVHLAT+ ITGTGINPARSLGAA+IYN+   W DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  168 VVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFK 284          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.588e-54
Identity = 100/116 (86.21%), Postives = 107/116 (92.24%), Query Frame = -1
Query:  326 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 673
            V+ GYTKGDGLGAE++GTFVLVYTVFSATDAKR+ARDSHVP LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIY+   GW  HWIFWVGPF GA LAA+YHQVV+RAIPFK
Sbjct:  176 VSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFK 291          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.570e-51
Identity = 92/112 (82.14%), Postives = 104/112 (92.86%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            +A GY++G GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IYNKD+ WDDHWIFWVGP VGA +AA YHQ ++RA
Sbjct:  166 LASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRA 277          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.568e-51
Identity = 92/109 (84.40%), Postives = 101/109 (92.66%), Query Frame = -1
Query:  338 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 664
            GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN D+ WDDHWIFWVGPF+GA +AA YHQ V+RA
Sbjct:  164 GYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRA 272          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.792e-51
Identity = 89/112 (79.46%), Postives = 104/112 (92.86%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            +A GY++G GLGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++YNKD+ WDDHWIFWVGP +GA +AA YHQ ++RA
Sbjct:  168 LASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRA 279          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.736e-50
Identity = 92/112 (82.14%), Postives = 102/112 (91.07%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            ++ GY+KG GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA
Sbjct:  165 LSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276          
The following BLAST results are available for this feature:
BLAST of CN189295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
PIP2_PEA8.596e-5891.38Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP15_MAIZE1.051e-5588.50Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP1_SOLLC3.057e-5587.07Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_ORYSJ3.057e-5589.38Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE3.057e-5586.32Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE2.588e-5486.21Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP21_MAIZE1.570e-5182.14Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP25_MAIZE4.568e-5184.40Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP22_MAIZE7.792e-5179.46Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP24_MAIZE1.736e-5082.14Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189295 ID=CN189295; Name=CN189295; organism=Citrus sinensis; type=EST; length=676bp
TTTTTTTTTTTTTTTTTAAAGAACTAGTTTTGTCCATATTATTACCAAGA
TGACATTGCACAAATCCATAGCCATACAAATGTACAAAGTGACAGCGCCC
ACCTACTTAACCATGGGCCCATCCGTCATCATCATCCACCTCTCTTCAAA
ATTAAAAAAAAAAAAAACGTTTTAAGGAAGGAAAACAGAAAAGCAGGCCC
AGGTCCAGCACCAGCAGATTTGAACAAAGGACTAATTAATATTTTATAAT
ACACATAAGCAAACCAGCAACAGCCATAAACAAATGCAGGTGCAATCACG
AACGTTGATGAAGCGATCAGCTTCATTTGAAGGGAATGGCTCTGATCACG
ACTTGGTGGTACAAAGCTGCGAGTCCAGCTCCAACGAATGGTCCCACCCA
AAAAATCCAGTGGTCATCCCAACCGCGGTCCTTGTTGTAAATGATTGCAG
CTCCAAGACTCCTCGCTGGGTTGATGCCAGTTCCGGTAATTGGGATAGTG
GCCAAGTGAACCAAAAACACAGCGAACCCAATTGGCAGAGGAGCCAAAAT
AGGAACATGAGAGTCCCTGGCGCTCCGTTTGGCATCAGTGGCAGAAAAAA
CTGTGTAGACAAGAACAAAAGTACCAATAATCTCGGCACCAAGACCATCA
CCCTTGGTGTAGCCATGAGCTACAAC
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