CN189295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.937e-17 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = -1 Query: 326 HG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 667 HG T G GL E+I TF LV+T+F++ D+KR+ + L IGF+V + HL I TG +NPARS G A+I W++HWI+WVGP +GA LA ALY V + K Sbjct: 154 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELK 262
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.636e-17 Identity = 51/116 (43.97%), Postives = 68/116 (58.62%), Query Frame = -1 Query: 326 HG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 667 HG T G GL E+I TF LV+T+F++ D+KR+ + L IGF+V + HL I TG +NPARS G A+I W++HWI+WVGP +GA LA LY V + K Sbjct: 151 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 9.614e-17 Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = -1 Query: 326 HG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 667 HG T G GL E+I TF LV+T+F++ D+KR+ + L IGF+V + HL I TG +NPARS G A+I W +HWI+WVGP +GA LA ALY V + K Sbjct: 151 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWANHWIYWVGPIMGAVLAGALYEYVFCPDVELK 259
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 344 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 664 G + G GLG EI+ TF LV V + TD +R VP L IG +V L HL I TG G+NPARS G+A++ + + HWIFWVGP +G AA+ + ++ Sbjct: 136 GVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVP----LAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWVGPMIGGAAAAIIYDFIL 235
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.653e-16 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 344 VAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 673 VA G ++ GL EII TF LVY V+S A D KR + + I+APL IG V L P G +NPAR+ G A++ + W +HWI+WVGPF+G LAAL ++ +I Sbjct: 143 VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMI 246
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 49/116 (42.24%), Postives = 67/116 (57.76%), Query Frame = -1 Query: 326 HG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 667 HG + G GL E+I TF LV+T+F++ D+KR+ + L IG +V + HL I TG +NPARS G A+I W++HWI+WVGP +GA LA LY V + K Sbjct: 151 HGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 344 VAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 673 +A G +GL EII TF LVY V+S D KR + + I+APL IG V L P +G +NPAR+ G A++ + W DHWI+WVGPF+G+ LAAL ++ ++ Sbjct: 143 LASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYEYMV 246
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = -1 Query: 344 GDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 652 G G E++ T + VF++ D + R P A LP+GF++ L HL IP TG G+NPARS A+I R + +HW+FW GP +GA LAAL +++ + Sbjct: 128 GQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = -1 Query: 344 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 658 T G + E+ T LV +F +TD +R + H L IGF+V L HL I TG +NPARSL AI+ K +DDHW+FW+GP VGA +A+L + V+ Sbjct: 126 TAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15 Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = -1 Query: 356 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 658 T G + E+I TF L +FS+TD++R++ P+ +P L IG +V L HL I TG +NPARS G A++ N R HW+FWVGP VGA LAA+ + Sbjct: 127 TPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAMLAAILY 221 The following BLAST results are available for this feature:
BLAST of CN189295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189295 ID=CN189295; Name=CN189295; organism=Citrus sinensis; type=EST; length=676bpback to top |