CN189295

Overview
NameCN189295
Unique NameCN189295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = -1
Query:  356 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 673
            +++  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:  122 LSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAVLAAILY 221          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = -1
Query:  344 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 673
            +++  T G  +  E+  T  LV  +F++TD +R       P    L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP VGA L +L +  V+
Sbjct:  121 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = -1
Query:  356 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 658
            T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA +AA+ +
Sbjct:  127 TPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAAVAAILY 221          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = -1
Query:  341 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 658
            T G  +  E + TF+LV  V   +D  R+     +   APL +G ++   HL  I +TG  +NPARS G A++ N    W DHW++WVGP VGA +AAL ++ V +
Sbjct:  140 TVGQAVLIEALITFILVVVVKGVSDPGRT----DIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = -1
Query:  356 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 658
            T+G  +  E+I TF L   +F++TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:  127 TQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAILY 221          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = -1
Query:  356 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 658
            T G  + AE+I TF L   VFS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A+I +  R    HW+FWVGP VGA  AA+ +
Sbjct:  127 TAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMS--RFSSAHWVFWVGPIVGAATAAIIY 221          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            +A G T   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G A+  N D  W +HW++W GP VG  +A + ++ + RA
Sbjct:  138 LAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = -1
Query:  359 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGL-AALY 664
            GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FWV P +GA +  ALY
Sbjct:  128 GYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVG---GWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14
Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = -1
Query:  347 VVAHGYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 676
            V A G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP +G G+A L ++V+
Sbjct:  129 VPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14
Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = -1
Query:  347 VVAHGYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 676
            V A G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP +G G+A L ++V+
Sbjct:  128 VPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
The following BLAST results are available for this feature:
BLAST of CN189295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AQP5_MOUSE5.276e-1542.99Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP2_HUMAN5.276e-1540.00Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP5_PIG6.890e-1544.12Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_HAEIX8.999e-1539.62Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP5_HUMAN8.999e-1544.12Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP5_SHEEP1.175e-1446.08Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP_CICVR1.535e-1438.39Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQPZ_PSEPK1.535e-1440.95Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
TIP1_MEDTR2.005e-1439.13Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP1_MEDSA2.005e-1439.13Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189295 ID=CN189295; Name=CN189295; organism=Citrus sinensis; type=EST; length=676bp
TTTTTTTTTTTTTTTTTAAAGAACTAGTTTTGTCCATATTATTACCAAGA
TGACATTGCACAAATCCATAGCCATACAAATGTACAAAGTGACAGCGCCC
ACCTACTTAACCATGGGCCCATCCGTCATCATCATCCACCTCTCTTCAAA
ATTAAAAAAAAAAAAAACGTTTTAAGGAAGGAAAACAGAAAAGCAGGCCC
AGGTCCAGCACCAGCAGATTTGAACAAAGGACTAATTAATATTTTATAAT
ACACATAAGCAAACCAGCAACAGCCATAAACAAATGCAGGTGCAATCACG
AACGTTGATGAAGCGATCAGCTTCATTTGAAGGGAATGGCTCTGATCACG
ACTTGGTGGTACAAAGCTGCGAGTCCAGCTCCAACGAATGGTCCCACCCA
AAAAATCCAGTGGTCATCCCAACCGCGGTCCTTGTTGTAAATGATTGCAG
CTCCAAGACTCCTCGCTGGGTTGATGCCAGTTCCGGTAATTGGGATAGTG
GCCAAGTGAACCAAAAACACAGCGAACCCAATTGGCAGAGGAGCCAAAAT
AGGAACATGAGAGTCCCTGGCGCTCCGTTTGGCATCAGTGGCAGAAAAAA
CTGTGTAGACAAGAACAAAAGTACCAATAATCTCGGCACCAAGACCATCA
CCCTTGGTGTAGCCATGAGCTACAAC
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