CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_NITOC (Aminomethyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPP-ARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+CLYG DM++ TP+E+GL W + + E F+G + Q G P ++VG G R+ + G G +TSGGFSP L+++IA+ V G A ++++RG+A + K PFV Sbjct: 226 TLRLEAGMCLYGADMDETTTPLESGLGWTVA-WKPPERDFIGRAVLEAQQAAGCPHQQVGLLLQGKGLMRNGQTITTNLGE--GVVTSGGFSPSLERSIALARVPVG---ADGPCEVQIRGRAVPAAMVKPPFV 353
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_ANOFW (Aminomethyltransferase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG ++ + +TP+EAGL +A+ + + F G E + KQ +EG P R VG H IG +T+G SP LKKNI + + + T+V+++VRGK + PF Sbjct: 230 TLRFEACLPLYGQELAKDITPIEAGLGFAVKTNKDVD--FFGKEILKKQKEEGAPRRLVGIEMIDKGIARHGYAVYVNNEQIGFVTTGTQSPTLKKNIGLALISTAFSSLDTEVEVDVRGKRLKARVVATPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNP6 (Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.049e-15 Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYG++++ P+EAGL W + R + FLG +++++ G R VG G H +G +TSG +SP L K IA+ YV L G ++ +E+RGK + K PF Sbjct: 236 TLRLEAAMPLYGHELDTDTNPLEAGLGWVVHLDRNPD--FLGRDRLVQAKTNGLERRLVGLELPGRNIARHGYPVAIADTTVGIVTSGSWSPTLSKAIALAYVPPALANLGQELWVEIRGKQVPATVVKRPF 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNE7 (Aminomethyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.049e-15 Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYG++++ P+EAGL W + R + FLG +++++ G R VG G H +G +TSG +SP L K IA+ YV L G ++ +E+RGK + K PF Sbjct: 236 TLRLEAAMPLYGHELDTDTNPLEAGLGWVVHLDRNPD--FLGRDRLVQAKTNGLERRLVGLELPGRNIARHGYPVAIADTTVGIVTSGSWSPTLSKAIALAYVPPALANLGQELWVEIRGKQVPATVVKRPF 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROMT (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.049e-15 Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYGND+ TP EAGL W + F+G + + KQ + G + VG G + + +++ + +G +TSG +SP L+K IA+ YV S + K T++++E+R K + I K PF Sbjct: 238 TLRLEASMHLYGNDINLDTTPFEAGLGWLV--HLEMPNDFIGRKALEKQAEVGTQKKLVGIQVLDKGIARKGYPVLYNSE--TVGIVTSGTWSPTLQKPIALAYVPSEIAKVNTQIEVEIRRKKHPAIIVKRPF 367
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYMTH (Aminomethyltransferase OS=Symbiobacterium thermophilum GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 45/134 (33.58%), Postives = 76/134 (56.72%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG+++ P+EAGL +A+ ++ + F+G + + + ++GP + VG G P + + G +GE+T+G FSP L+KNIA+ YV GT+V++ +RG+A + + PF Sbjct: 239 TLRFEAKLPLYGHEISDQHNPLEAGLGFAVKLKKGVD--FIGRDALARIKEQGPTRKLVGIEMIDRGVPRQGYPVAVG--GEVVGEVTTGSFSPTLEKNIALAYVPVAHSAVGTEVEVIIRGRALKARVVETPF 368
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_RALME (Aminomethyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG------GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM+ H +P++AGL+W + ++E F+G +L + FAG G R+H KV G+ GEITSG FSP L ++IA + + GT+V++E+R + + K+PFV Sbjct: 241 TLRLEAGMNLYGQDMDIHTSPLDAGLSWTVD--LQSERDFIGKSALLASGQQKT-------FAGLILRDKGGVLRAHQKVITPAGD--GEITSGTFSPSLSQSIAFARLPRDI-APGTEVQVEIRDRKLTATVVKLPFV 367
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEGPH (Aminomethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gcvT PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ TP+E+GL W + K + GF+G ++ Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 226 TLRLEAGMLLYGQDMDETTTPLESGLAWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPM---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEGPC (Aminomethyltransferase OS=Legionella pneumophila (strain Corby) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ TP+E+GL W + K + GF+G ++ Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 226 TLRLEAGMLLYGQDMDETTTPLESGLAWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPV---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_HERA2 (Aminomethyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 50/140 (35.71%), Postives = 72/140 (51.43%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 SLR E GL LYG+++E+ + P EA L W + + +G F+G+E + GP VG G AR V G+ +G +T+G SP L KN+A VK+G K G +V + +R K + K PF +Y K Sbjct: 225 SLRFEPGLALYGHEIERDINPYEAKLGWVV---KLDKGPFIGSEALHDIKANGPVRTLVGLEMTGRGIARQGYPVVALDGSELGVVTTGMPSPSLGKNLAYALVKAGSLKIGAEVDVLIREKPVRATVVKTPFYKARYKK 361 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |