CN189287

Overview
NameCN189287
Unique NameCN189287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP2A8_MESAU (Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP2A8 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 45/169 (26.63%), Postives = 80/169 (47.34%), Query Frame = -2
Query:  167 LDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWK 673
            L+LF AG +T S T  +    L+  P   +K   E++Q +G+       D +++PY +AV+ E  R         PR  + + +   + IPK   V   + ++ +D   + +P  F P+ F   +   K  N   +PF  G+R C G  LA   L++   +++ +F +K
Sbjct:  296 LNLFFAGTETVSTTTRYGFLLLMKYPHIAAKMHEEIDQVIGRNRQPKYEDHLKMPYTEAVIYEIQRFVDVVPLGLPRSTTKDIKFRDFLIPKGTDVFPVLSSVLKDPKFFSNPNDFNPQHFSDDKGQFKKSN-AFMPFSVGKRYCFGESLAKMELFIFFTTIMQNFCFK 463          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C519E_DICDI (Probable cytochrome P450 519E1 OS=Dictyostelium discoideum GN=cyp519e1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 59/223 (26.46%), Postives = 100/223 (44.84%), Query Frame = -2
Query:  104 DRNYIKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKG-NSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVA-GYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERF----------------------LGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKFEDGITQHNMDMEEKFGLTLN 700
            +++ + H+  D   AG+DT ++TLEW    L  NPE   K   EL   VGK   ++        PYL   +KET R+         R +  +   + G  IPK   ++ N++ IG  +   + P S+ PER+                      + +EI     +  ++PF  G R CPG  ++   L+L   +++ +F+  F +G     +D  E FG+T++
Sbjct:  278 EKDMVIHVSTDFLLAGSDTNASTLEWFCIFLANNPEIQKKAYEELISVVGKDCKAVTTKYRDDCPYLVGAIKETLRMRTPAPLSLIRVSEEDFMTSGGIFIPKGTQIVPNLYGIG--QNFVDDPSSYKPERWVEYYKNKTPTREMEATTETKSNITTEILPNDLDKVVLPFSIGPRNCPGNIISEINLFLACSNILLNFE--FSNG--GKKIDETEVFGITIH 494          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 54/186 (29.03%), Postives = 92/186 (49.46%), Query Frame = -2
Query:  167 DKSVEIDRNYIKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIW-ESPCSFMPERF-LGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWK 718
            DK +  D   I  LF+ L A G DTT+ +L ++   L  +PE   K + E+++       +    + +L YL+ VVKE  RL+        RK    T V G  I     + V+ W++  D  +W +    F PER+  G E+      +  +PFG G RIC G+ LA+  + ++L +++ ++ ++
Sbjct:  308 DKHLTFDE-IIGQLFVFLLA-GYDTTALSLSYSSYLLATHPEIQKKLQEEVDREC-PDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESGDELFFAKGGY--LPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFE 488          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C13A6_CAEEL (Putative cytochrome P450 CYP13A6 OS=Caenorhabditis elegans GN=cyp-13A6 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 48/166 (28.92%), Postives = 79/166 (47.59%), Query Frame = -2
Query:  167 AAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIW-ESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWK 661
            AAG DTT+ +L +A   L  +PE  +K + E+++       I    + +L YL+ V+KET RL+        RK    T + G    +   + V+ W +  +  IW E    F PER+     +    N   IPFG+G R C G+ LA     ++L  ++  + ++
Sbjct:  323 AAGFDTTALSLSYATYLLATHPEIQTKLQEEVDREC-PDPEIFFDHLSKLKYLECVMKETLRLYPLGTTANTRKCMRETTINGVNFDEGMNIQVDTWTLHHNPRIWGEDVEDFKPERWENGACEHLEHNGSYIPFGSGPRQCIGMRLAQMEQKILLAQILKEYSFR 487          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = -2
Query:  170 GADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRN-FELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDW 655
            G +TTS +L + + EL  +P+   K + E++ T           ++++ YL  VV ET R+         R    + ++ G +IPK   V+V ++ +  +   W  P  F PERF  S+ +  G N +  +PFG G R C G+  A+  + L L  ++ +F +
Sbjct:   17 GYETTSTSLSFIIYELATHPDVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLE-RLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERF--SKKNKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSF 176          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP2BA_MOUSE (Cytochrome P450 2B10 OS=Mus musculus GN=Cyp2b10 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 50/190 (26.32%), Postives = 86/190 (45.26%), Query Frame = -2
Query:  176 DKSVEIDRNYIKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPF---------GAGRRICPGLPLAIRMLYLMLGSLINSF 718
            +++ E     +    L LF  G +T+S TL +    +L  P    K + E++Q +G        D  ++PY  AV+ E  R         P + + +T   GY +PK+  V   + +   D   +E P SF P++FL +   +K ++   +PF           G+RIC G  +A   L+L   S++ +F
Sbjct:  278 NQNAEFHHQNLMMSVLSLFFVGTETSSTTLHYGFLLMLKYPHVTEKVQKEIDQVIGSHRLPTLDDRTKMPYSDAVIHEIQRFSDLIPIGVPHRVTKDTLFRGYLLPKNTEVYPILSSALHDPQYFEQPDSFNPDQFLDANGALK-KSEAFLPFSTGQIFDQKSVGKRICLGESIARSELFLFFTSILQNF 466          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C36A1_CAEEL (Probable cytochrome P450 CYP36A1 OS=Caenorhabditis elegans GN=cyp-36A1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 49/168 (29.17%), Postives = 81/168 (48.21%), Query Frame = -2
Query:  170 DLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQ-VAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDW 670
            DL++AG +T    L +A   L+ NPE   +   EL++ VG+   +   D   LPY  A ++E +RL         R   T+ +   GY +     V+    ++  D+  +  P  F P+RFL S  +   R+  + PF  G+R C G  LA   ++L   +L+ +F+W
Sbjct:  297 DLYSAGMETIIIVLRFAFLYLVNNPETQKRIHEELDRNVGRERQVVMDDQKHLPYTCAFLQEVYRLGYVLPVNFLRCTLTDVEDCEGYRLNAGTRVIAQFQSVHVDKKHFPDPEHFNPDRFLNSRGEYI-RDDRVNPFSMGKRSCLGENLARMEVFLYFCTLMQNFEW 463          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 45/164 (27.44%), Postives = 79/164 (48.17%), Query Frame = -2
Query:  167 AGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWK 658
            AG +TTS+TL + +  L  +P+   K + E+++ +          ++ + YL  V+ ET RL+        R    + ++ G  IPK + V++  +A+  D   W  P  F PERF   E       +  +PFG G R C G+  A+  + L L  ++ +F ++
Sbjct:  306 AGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLE-RVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPEEFQPERF-SKENKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP1A2_CHICK (Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 41/128 (32.03%), Postives = 63/128 (49.22%), Query Frame = -2
Query:  308 IKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTR-MELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFL 688
            I +L  D+F AG DT +  L W++  L+  P +  K +  EL+  +G+      S+   LPY +A + ET           P   + +T + G+ IPK+  V VN W +  +  +WE P  F  ERFL
Sbjct:   44 IINLVNDIFGAGFDTVTTALSWSLMYLVTQPHSQKKIQESELDTAIGRERRSWLSERSMLPYKEAFILETVPTWQFVPFTIPHSTTRDTTLNGFHIPKECCVFVNQWQVNHEAELWEDPFVFRTERFL 171          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C90D2_ORYSJ (Cytochrome P450 90D2 OS=Oryza sativa subsp. japonica GN=CYP90D2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 58/191 (30.37%), Postives = 88/191 (46.07%), Query Frame = -2
Query:  158 DKSVEIDRNYIKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGK----GNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKFED 718
            D S E+    I    +DL     D+    +  A+  L   P AL +   E  Q   +    G ++  +D + L + Q V+ ET RL         RKA  + +V G+ IPK   V V   ++  D+ +++ P  F P R+   E D+   +F   PFG G+R+CPGL LA     + L  L+ SF W  E+
Sbjct:  279 DGSDELTDELISDNMIDLMIPAEDSVPVLITLAVKFLSECPLALHQLEEENIQLKRRKTDMGETLQWTDYMSLSFTQHVITETLRL-GNIIGGIMRKAVRDVEVKGHLIPKGWCVFVYFRSVHLDDTLYDEPYKFNPWRW--KEKDMSNGSFT--PFGGGQRLCPGLDLARLEASIFLHHLVTSFRWVAEE 464          
The following BLAST results are available for this feature:
BLAST of CN189287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2A8_MESAU1.232e-1226.63Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP... [more]
C519E_DICDI1.232e-1226.46Probable cytochrome P450 519E1 OS=Dictyostelium di... [more]
C13A7_CAEEL1.232e-1229.03Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
C13A6_CAEEL1.232e-1228.92Putative cytochrome P450 CYP13A6 OS=Caenorhabditis... [more]
CP3AJ_CAPAE1.609e-1228.22Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP2BA_MOUSE1.609e-1226.32Cytochrome P450 2B10 OS=Mus musculus GN=Cyp2b10 PE... [more]
C36A1_CAEEL1.609e-1229.17Probable cytochrome P450 CYP36A1 OS=Caenorhabditis... [more]
CP3AB_MOUSE2.102e-1227.44Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP1A2_CHICK2.102e-1232.03Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN... [more]
C90D2_ORYSJ2.102e-1230.37Cytochrome P450 90D2 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189287 ID=CN189287; Name=CN189287; organism=Citrus sinensis; type=EST; length=722bp
AGCCCTTGGCTATAACCTTATTCCGTCATTGTGGTACATAAAAGACTAAA
CTATATGTTACTACTTAAATGGCAATAGGGATTGCATGAAGTGGCTGAGC
CTTATTTAAGGTGAGACCAAACTTCTCTTCCATGTCCATGTTATGTTGAG
TAATTCCATCTTCAAATTTCCAATCAAAGGAATTAATAAGTGAACCCAAC
ATTAGATATAACATTCTTATAGCCAACGGCAAACCAGGACATATTCGTCG
TCCAGCACCAAATGGTATTAACTCAAAATTCCGGCCTTTGACATCAATCT
CCGACCCCAAGAATCTCTCGGGCATGAAAGAACAAGGGCTCTCCCATATG
CCTTCATCCCTGCCAATAGCCCATACATTAACTAAAACTAGGGCATCCTT
TGGTATTGTATAGCCTGCGACTTGTGTGTTTGTTGAGGCTTTGCGTGGAA
GTAACAAGGGAGCTGCTGGGTGCAACCTAAAAGTTTCTTTGACTACTGCT
TGTAGATAAGGCAGCCGAATGATGTCTGATTCGTCAATCGAGTTCCCTTT
GCCAACTGTTTGTTCTAGCTCCATTCTAGTTTTGGATAAAGCCTCTGGGT
TGCAGAGTAGTTCAGTCATTGCCCATTCCAATGTGTTCGAAGTTGTATCA
GCACCCGCCGCAAACAAATCAAGAAACAAATGCTTGATATAATTTCTATC
AATCTCCACGCTCTTGTCATCC
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