CN189287

Overview
NameCN189287
Unique NameCN189287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C11B2_RAT (Cytochrome P450 11B2, mitochondrial OS=Rattus norvegicus GN=Cyp11b2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12
Identity = 56/206 (27.18%), Postives = 100/206 (48.54%), Query Frame = -2
Query:   71 IKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKFEDGITQHNMDMEEKFGLTLNKAQPLHAIPIA 688
            IK   ++L A   DTT+  L   + EL  NP+     R E         +  +  +  LP L+A +KET RL+        R  +++  +  Y +P   LVL+ ++++GR+  ++  P  +MP+R+L      + R+F+ + FG G R C G  LA   + L+L  ++ +F     + + Q ++ M  +F L  + +  L   PI+
Sbjct:  314 IKANSMELTAGSVDTTAIPLVMTLFELARNPDVQQALRQETLAAEASIAANPQKAMSDLPLLRAALKETLRLYPVGGFLE-RILNSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPRPERYMPQRWL-----ERKRSFQHLAFGFGVRQCLGRRLAEVEMLLLLHHMLKTFQ---VETLRQEDVQMAYRFVLMPSSSPVLTFRPIS 510          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 44/161 (27.33%), Postives = 74/161 (45.96%), Query Frame = -2
Query:  176 AGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSF 658
            AG DT + ++ W +  L  NPE   + R E+   +G G+SI    +  + Y    +KET RL           +   T   G T+P    V++++W +  +  +W++P  F P RF     D +   +  +PF AG R C G   A+  L + +  ++  F
Sbjct:  316 AGHDTLAASISWILYCLALNPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKVFDPLRFSQENSDQR-HPYAYLPFSAGSRNCIGQEFAMIELKVTIALILLHF 475          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 46/162 (28.40%), Postives = 75/162 (46.30%), Query Frame = -2
Query:  176 GADTTSNTLEWAMTELLCNPEALSKTRMELEQTVG--KGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSF 655
            G DTT++ L W +  L  +PE   + R E+ + +   +   I+  D+ +LP+L   +KE+ RLH        R         G  IPK  + +++++ I  +  +W  P  F P RF  SE   K      IPF AG R C G   A+  + +++   +  F
Sbjct:  331 GHDTTASALSWILYNLARHPEYQERCRQEVWELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVFDPFRF-DSENRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVVVALTLLRF 491          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 46/164 (28.05%), Postives = 79/164 (48.17%), Query Frame = -2
Query:  167 AGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWK 658
            AG +TTS+TL + +  L  +P+   K + E+++T+          ++ + YL  V+ ET RL+        R    + ++ G  IPK + V++  +A+  D   W  P  F PERF   E       +  +PFG G R C G+  A   + L L  ++ +F ++
Sbjct:  306 AGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLE-RFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWPEPEEFQPERF-SKENKGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQ 467          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP26A_DANRE (Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 54/185 (29.19%), Postives = 86/185 (46.49%), Query Frame = -2
Query:  155 IKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTV-------GKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKFEDG 688
            +K    +L   G +TT++T    +  L  N E + K R E+++ V       GKG S++  D  +L Y   V+KET R++        R A    ++ GY IPK   V+ ++        ++ +   F PERF+   ++  G  F  IPFG G R+C G   A  +L + L  L    +W   +G
Sbjct:  286 MKEAATELLFGGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELLD--QLKYTGCVIKETLRINPPVPGGF-RVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKEEFQPERFMSKGLE-DGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHCNWILSNG 466          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = -2
Query:  470 IDRNYIKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLH 703
            I R+ +K L LD F+AG DT    LEW MTELL +P A+ K + E++    +   I E D+  + YL+AV+KET RLH
Sbjct:  280 IQRDSLKALLLDPFSAGTDTIYTVLEWTMTELLRHPRAMEKLQNEVQGLAQEKAEITEDDLPNMHYLKAVIKETLRLH 357          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: C11B2_MOUSE (Cytochrome P450 11B2, mitochondrial OS=Mus musculus GN=Cyp11b2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 56/206 (27.18%), Postives = 99/206 (48.06%), Query Frame = -2
Query:   71 IKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKFEDGITQHNMDMEEKFGLTLNKAQPLHAIPIA 688
            IK   ++L A   DTT+  L   + EL  NP+     R E         +  +  +  LP L+A +KET RL+        R  S++  +  Y +P   LVL+ ++++GR+  ++  P  +MP+R+L      + R+F+ + FG G R C G  LA   + L+L  ++ +F     + + Q ++ M  +F L  +    L   P++
Sbjct:  304 IKANSMELTAGSVDTTAIPLVMTLFELARNPDVQKALRQESLAAEASIAANPQKAMSDLPLLKAALKETLRLYPVGGFLG-RILSSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPRPERYMPQRWL-----ERKRSFQHLAFGFGVRQCLGRRLAEVEMMLLLHHILKTFQ---VETLRQEDVQMAYRFVLMPSSEPVLTFRPVS 500          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: T5H_TAXCU (Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 53/188 (28.19%), Postives = 83/188 (44.15%), Query Frame = -2
Query:  176 DDKSVEIDRNYIKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKT---RMELEQTVGKGNSIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRN---FELIPFGAGRRICPGLPLAIRMLYLMLGSLINSF 721
            DDK   +  + I   F  L  A  DTT++ +      L  NPE   K    ++E+     +G  I   D+  + Y   V +ET R+         RKA T+ Q  GYTIPK   +L   ++    +  +  P  FMP RF     D +G++   +  +PFG G+R C G   +   + L +   + +F
Sbjct:  285 DDKGTPLTNDEILDNFSSLLHASYDTTTSPMALIFKLLSSNPECYQKVVQEQLEILSNKEEGEEITWKDLKAMKYTWQVAQETLRMFPPVFGTF-RKAITDIQYDGYTIPKGWKLLWTTYSTHPKDLYFNEPEKFMPSRF-----DQEGKHVAPYTFLPFGGGQRSCVGWEFSKMEILLFVHHFVKTF 466          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: ERG5_SCHPO (Cytochrome P450 61 OS=Schizosaccharomyces pombe GN=erg5 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 51/185 (27.57%), Postives = 81/185 (43.78%), Query Frame = -2
Query:  167 EIDRNYIKHLFLDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGN-----SIDESDIIRLPYLQAVVKETFRLHXXXXXXXPRKASTNTQVAGYTIPKDALVLVNVWAIGRDEGIWESPCSFMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWK 706
            E     I   FL    A  D TS+ + W    L  +P+ L K R E +  + KG+     S+D  +  ++ Y +AVVKE  RL         R          YT+PKDA+V+  ++    D  ++  P +F P+R+  + +  +     ++ FG G  +C G   A+  L   +G      DWK
Sbjct:  303 EFSDEEISLTFLSFLFASQDATSSAMTWLFQLLADHPDVLQKVREE-QLRIRKGDIDVPLSLDLME--KMTYTRAVVKECLRLRPPVLMVPYRVKKAFPITPDYTVPKDAMVIPTLYGALHDSKVYPEPETFNPDRWAPNGLAEQSPKNWMV-FGNGPHVCLGQRYAVNHLIACIGKASIMLDWK 483          
BLAST of CN189287 vs. ExPASy Swiss-Prot
Match: CP52J_CANMA (Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A10 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 58/181 (32.04%), Postives = 85/181 (46.96%), Query Frame = -2
Query:  173 LDLFAAGADTTSNTLEWAMTELLCNPEALSKTRMELEQTVGKGNSIDESDI----IRL-PYLQAVVKETFRLHXXXXXXXPRKASTNTQVAG--------YTIPKDALVLVNVWAIGRDEGIWESPCS-FMPERFLGSEIDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFD 673
            L++  AG DTT+  L +A+ EL  NPE  SK R E+    G  +     DI    ++L  YL+AV+ ET RL+          A   T   G          + K   V+ +V+A+ RDE  +    + F PER+   E +V+   +  +PF  G RIC G   A+     +L  LI SF+
Sbjct:  310 LNILLAGRDTTAGLLSFAVFELGRNPEVWSKLRQEIGHKFGLDSYSRVEDISFELLKLCEYLKAVLNETLRLYPSVPRNARFAAKNTTLPHGGGPDGMSPILVRKGQTVMYSVYALQRDEKYYGKDANEFRPERWF--EPEVRKLGWAFLPFNGGPRICLGQQFALTEASYVLARLIQSFE 488          
The following BLAST results are available for this feature:
BLAST of CN189287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C11B2_RAT3.586e-1227.18Cytochrome P450 11B2, mitochondrial OS=Rattus norv... [more]
CP4X1_HUMAN4.683e-1227.33Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP4F5_RAT4.683e-1228.40Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP341_MOUSE4.683e-1228.05Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
CP26A_DANRE4.683e-1229.19Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=... [more]
C71A3_SOLME4.683e-1246.15Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C11B2_MOUSE4.683e-1227.18Cytochrome P450 11B2, mitochondrial OS=Mus musculu... [more]
T5H_TAXCU6.116e-1228.19Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata P... [more]
ERG5_SCHPO6.116e-1227.57Cytochrome P450 61 OS=Schizosaccharomyces pombe GN... [more]
CP52J_CANMA6.116e-1232.04Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189287 ID=CN189287; Name=CN189287; organism=Citrus sinensis; type=EST; length=722bp
AGCCCTTGGCTATAACCTTATTCCGTCATTGTGGTACATAAAAGACTAAA
CTATATGTTACTACTTAAATGGCAATAGGGATTGCATGAAGTGGCTGAGC
CTTATTTAAGGTGAGACCAAACTTCTCTTCCATGTCCATGTTATGTTGAG
TAATTCCATCTTCAAATTTCCAATCAAAGGAATTAATAAGTGAACCCAAC
ATTAGATATAACATTCTTATAGCCAACGGCAAACCAGGACATATTCGTCG
TCCAGCACCAAATGGTATTAACTCAAAATTCCGGCCTTTGACATCAATCT
CCGACCCCAAGAATCTCTCGGGCATGAAAGAACAAGGGCTCTCCCATATG
CCTTCATCCCTGCCAATAGCCCATACATTAACTAAAACTAGGGCATCCTT
TGGTATTGTATAGCCTGCGACTTGTGTGTTTGTTGAGGCTTTGCGTGGAA
GTAACAAGGGAGCTGCTGGGTGCAACCTAAAAGTTTCTTTGACTACTGCT
TGTAGATAAGGCAGCCGAATGATGTCTGATTCGTCAATCGAGTTCCCTTT
GCCAACTGTTTGTTCTAGCTCCATTCTAGTTTTGGATAAAGCCTCTGGGT
TGCAGAGTAGTTCAGTCATTGCCCATTCCAATGTGTTCGAAGTTGTATCA
GCACCCGCCGCAAACAAATCAAGAAACAAATGCTTGATATAATTTCTATC
AATCTCCACGCTCTTGTCATCC
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