CN189282

Overview
NameCN189282
Unique NameCN189282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189282 vs. ExPASy Swiss-Prot
Match: CYSE_HELPY (Serine acetyltransferase OS=Helicobacter pylori GN=cysE PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  431 LLNYKGFLACQAHRVAHKLWTQSRRPLALALQSRISDVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLGGTGKASG 697
            LL Y G  A   +R+AH L  +    +A AL      +  ++IHP AKIG+G+  DH  GVVIGET  IG++V+I H VTLGGTGK  G
Sbjct:   25 LLLYPGIHALLCYRLAHALHKRRFYFIARALSQLARFITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKG 113          
BLAST of CN189282 vs. ExPASy Swiss-Prot
Match: CYSE_HELPJ (Serine acetyltransferase OS=Helicobacter pylori J99 GN=cysE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  431 LLNYKGFLACQAHRVAHKLWTQSRRPLALALQSRISDVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLGGTGKASG 697
            LL Y G  A   +R+AH L  +    +A AL      +  ++IHP AKIG+G+  DH  GVVIGET  IG++V+I H VTLGGTGK  G
Sbjct:   25 LLLYPGIHALLCYRLAHALHKRRFYFIARALSQLARFITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKG 113          
BLAST of CN189282 vs. ExPASy Swiss-Prot
Match: CYSE_SYNY3 (Serine acetyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=cysE PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 2
Query:  431 LLNYKGFLACQAHRVAHKLWTQSRRPLALALQSRISDVFA-VDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLGGTGKASG 697
            L  Y G  A   HR +H+L+T    P    L S ++  F  ++IHP A+IG+G+  DH  GVVIGETA++G+   I   VTLGGTGK SG
Sbjct:   26 LFCYPGLQALLIHRFSHRLYTLGL-PFFPRLMSHLARFFTGIEIHPGAQIGQGVFIDHGMGVVIGETAIVGDYSLIYQGVTLGGTGKESG 114          
BLAST of CN189282 vs. ExPASy Swiss-Prot
Match: CYSE_STAXY (Serine acetyltransferase OS=Staphylococcus xylosus GN=cysE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 2
Query:  431 LLNYKGFLACQAHRVAHKLWTQSRRPLALALQSRISDVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLGGTGKASG 697
            + +Y G  A  +H +AH+L+ + +  LA  +         ++IHP A+IG+ +  DH  GVVIGET  IG+NV+I   VTLGGTGK  G
Sbjct:   29 ITSYAGVHAVWSHLIAHELYKKKKYVLARLISQVTRFFTGIEIHPGAQIGRRLFIDHGMGVVIGETCRIGDNVTIYQGVTLGGTGKERG 117          
BLAST of CN189282 vs. ExPASy Swiss-Prot
Match: NIFP_AZOCH (Probable serine acetyltransferase OS=Azotobacter chroococcum mcd 1 GN=nifP PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 42/89 (47.19%), Postives = 50/89 (56.18%), Query Frame = 2
Query:  431 LLNYKGFLACQAHRVAHKLWTQSRRPLALALQSRISDVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLGGTGKASG 697
            L  Y G  A   +R+AH+LW  +  P   A+  R   V  VDIHP A IG     DH   VVIGETA IG +V++ H VTLGGT  A G
Sbjct:   28 LTTYPGVHAIMLYRLAHRLWRPNALPRPAAVV-RARLVSNVDIHPGAVIGARFFIDHGACVVIGETAEIGRDVTLYHGVTLGGTTGAKG 115          
BLAST of CN189282 vs. ExPASy Swiss-Prot
Match: SRPH_SYNE7 (Serine acetyltransferase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 41/88 (46.59%), Postives = 49/88 (55.68%), Query Frame = 2
Query:  416 SFSHCLLNYKGFLACQAHRVAHKLWTQSRRPLALALQSRIS-DVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLG 676
            S S  L  Y G  A   HR+AH+L+ Q   PL   + + +S     +DIHP A IG     DH TGVVIGET VIG+ V I   VTLG
Sbjct:  155 SISEILFCYPGITAITFHRLAHRLY-QLGLPLLARITAEVSHSETGIDIHPGAAIGGSFFIDHGTGVVIGETCVIGDRVRIYQAVTLG 241          
The following BLAST results are available for this feature:
BLAST of CN189282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
CYSE_HELPY3.314e-1548.31Serine acetyltransferase OS=Helicobacter pylori GN... [more]
CYSE_HELPJ3.314e-1548.31Serine acetyltransferase OS=Helicobacter pylori J9... [more]
CYSE_SYNY36.249e-1446.67Serine acetyltransferase OS=Synechocystis sp. (str... [more]
CYSE_STAXY1.392e-1342.70Serine acetyltransferase OS=Staphylococcus xylosus... [more]
NIFP_AZOCH2.010e-1247.19Probable serine acetyltransferase OS=Azotobacter c... [more]
SRPH_SYNE79.977e-1246.59Serine acetyltransferase, plasmid OS=Synechococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189282 ID=CN189282; Name=CN189282; organism=Citrus sinensis; type=EST; length=702bp
AGGGTGGTTTTAGATCCTCCGTTCTCGGAACAAGTGGGTAAGATTGTTTT
TTTACAAATAAAGAAAGATGCCGGCGGGCGAGCTCAGGTACCCATCTCCG
GCGCGAAATTTAACGATGGAAACACACGCCGCCGGAGACGACGAGGCTTG
GGTGTGGGCCCAGATAAAAGCCGAGGCACGCCGCGACGCCGAGTCTGAGC
CGGCTTTAGCCAGCTACCTCTACTCGACCATCCTCTCTCACTCTTCCTTG
GAGAGATCGCTGGCGTTTCATTTGGGAAACAAGCTCTGCTCCTCCACGCT
TCTCTCCACTCTCTTGTACGATCTCTTTCTGGACACTTTCTCCTCCGACC
CCGCTCTCCGCGCCGCGGCGGTCGCCGATCTTCGCGCCGCCCGTGTCCGT
GACCCCGCTTGCGTTTCCTTCTCTCACTGCCTCCTCAATTACAAAGGCTT
CTTGGCTTGCCAGGCTCACCGAGTAGCACACAAGCTCTGGACTCAGTCAC
GTAGGCCGCTGGCACTAGCATTACAATCCCGTATCTCTGATGTGTTTGCT
GTTGATATACACCCAGCTGCAAAAATAGGGAAAGGGATTTTGTTTGATCA
TGCAACAGGTGTGGTAATAGGTGAGACCGCAGTTATTGGCAACAATGTGT
CAATCTTGCATCATGTTACACTTGGCGGTACGGGGAAAGCAAGCGGGGAT
CG
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