DR908639

Overview
NameDR908639
Unique NameDR908639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908639 vs. ExPASy Swiss-Prot
Match: DCAM_LEIDO (S-adenosylmethionine decarboxylase proenzyme OS=Leishmania donovani PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.168e-13
Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 1
Query:   31 VRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHF--GK---FG-MDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKR-----ASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSD 582
            V +   ++ F   Q  PH S ++E A L  HF  GK   FG +DS  + +   D+  R      S+E  +       L M M GLD+++     +  F  T+  +AA+       R +     + D +F+PCGYS+N+I  +   T+H+TPED  S+AS+E    +      +  +++VL  F+P  F+V +  D
Sbjct:  130 VSFMHKNYSFPWMQKGPHTSLADEFATLKQHFPTGKPYIFGPVDSDHYFLFCYDDIIR----PCSSEDDTQ------LSMTMYGLDKEQTKHWFSDRFISTSAETAAIRAATHLDRVVDGTWTLHDLQFEPCGYSINAIRDEEYQTMHITPEDHCSFASYET---NSRAANYSDRMKKVLGVFRPQRFTVIVFLD 311          
BLAST of DR908639 vs. ExPASy Swiss-Prot
Match: DCAM_YEAST (S-adenosylmethionine decarboxylase proenzyme OS=Saccharomyces cerevisiae GN=SPE2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.713e-12
Identity = 63/213 (29.58%), Postives = 98/213 (46.01%), Query Frame = 1
Query:   31 VRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVY------TLEMCMTGLDRKRASVFYKTNESSAAMMTE---DSG--IRKILPKSEICD------------------FEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVK----LTPLLERVLACFKPAEFSV 567
            V Y+R  F+F   Q   H+++++EV  L+    KF  +  ++ +G  D +  W++Y    +  +     Y      T E+ MT LD + AS F    E+S   + E   D G  +   + K+   D                  F F PCGYS N I  +    T+HVTPE G+SYASFE+    F++ +       +L  +L  F+P EFS+
Sbjct:  139 VFYSRRCFLFPCKQAAIHQNWADEVDYLN----KFFDNGKSYSVGRNDKSNHWNLYVTETDRSTPKGKEYIEDDDETFEVLMTELDPECASKFVCGPEASTTALVEPNEDKGHNLGYQMTKNTRLDEIYVNSAQDSDLSFHHDAFAFTPCGYSSNMILAEKYYYTLHVTPEKGWSYASFESNIPVFDISQGKQDNLDVLLHILNVFQPREFSM 347          
The following BLAST results are available for this feature:
BLAST of DR908639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DCAM_LEIDO5.168e-1329.74S-adenosylmethionine decarboxylase proenzyme OS=Le... [more]
DCAM_YEAST5.713e-1229.58S-adenosylmethionine decarboxylase proenzyme OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16767 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-19_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908639 ID=DR908639; Name=DR908639; organism=Citrus sinensis; type=EST; length=602bp
GCTGAGTCCCTCTCGTTGTCTGTTCGATCTGTGAGATACACTCGTGGAAG
CTTCATATTTGCTGGGGCTCAGCCATTTCCACACCGTAGCTTCTCTGAGG
AAGTAGCTGTCCTTGATGGACACTTTGGCAAGTTTGGTATGGACAGCACA
GCTTTTGTCATGGGTAGTCCTGACAACACAAAGAGATGGCATGTTTACTC
TGCCTCTGCTGAAGCAGGAAGCCATGTAAACCCAGTTTACACTCTAGAGA
TGTGCATGACTGGTTTGGACAGAAAGAGGGCATCTGTCTTCTACAAAACT
AATGAAAGCTCAGCCGCTATGATGACCGAGGACTCTGGCATCAGAAAGAT
TCTTCCAAAATCTGAGATTTGTGATTTTGAGTTTGACCCTTGTGGTTACT
CCATGAATAGTATTGAAGGGGATGCAGTATCTACTATCCACGTCACACCT
GAAGATGGTTTCAGTTATGCAAGTTTTGAGGCTGTGGGTTATGATTTTGA
GGTTGTGAAGTTGACTCCCTTGCTTGAGAGGGTGCTTGCTTGCTTCAAAC
CCGCTGAGTTTTCTGTTGCTCTGCATTCTGACATTGTTGGCGATGAACAT
GG
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