CN189273

Overview
NameCN189273
Unique NameCN189273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.268e-18
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            + Y K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   31 KTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQ 190          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.869e-18
Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 2
Query:  434 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            D LPE+ DWRE G++  VKDQG CGSCW FS   ++E+      G  ISLSEQ+LVDC +++ N+GC+GGL   AFE++
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSY-NEGCDGGLMDYAFEFV 93          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.869e-18
Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = 2
Query:  434 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            DVLP++ DWRE G V PVK+QG CGSCW F    ++E       G  ISLSEQQLVDC+    N GC GG P +AF+YI
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCST--RNHGCEGGWPYRAFQYI 77          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.869e-18
Identity = 60/164 (36.59%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  F  ++ K Y S  E   RF  F  NL+ I   N+   + +  +NKF+D S +E      G A     QN       N     D  P   DWR    V+ VK+QG CG+CW F+T  SLE+ +     + I+LSEQQL+DC   + + GCNGGL   A+E +
Sbjct:   28 FEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRP--PDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDC--DYVDAGCNGGLLHTAYEAV 187          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.869e-18
Identity = 57/168 (33.93%), Postives = 83/168 (49.40%), Query Frame = 2
Query:  212 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA-----------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            +Y K+Y   EE+ L+   + +N+  I   NR+      +Y + +N FAD + EEF+   +G       T K   K              D LP+  DWR  G V+ V+ QG C SCW F  TG++E    +  GK I LS Q L+DC++   N+GC  G    AF+Y+
Sbjct:   35 KYEKLYSPEEEV-LKRVVWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYV 201          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.052e-18
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            + Y K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   32 KTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQ 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.599e-18
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            + Y K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   31 KTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENYGCGGGYMTNAFQYVQ 190          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.618e-18
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            + Y K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   32 KTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQ 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.618e-18
Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            + + K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   31 KTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQ 190          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.618e-18
Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            + + K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   31 KTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQ 190          
The following BLAST results are available for this feature:
BLAST of CN189273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATK_BOVIN2.268e-1834.57Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CYSPL_SOLLC3.869e-1853.16Low-temperature-induced cysteine proteinase (Fragm... [more]
CPGP1_ZINOF3.869e-1855.70Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATV_NPVHC3.869e-1836.59Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATQ_RAT3.869e-1833.93Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_CANFA5.052e-1834.57Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_RABIT6.599e-1834.57Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_PIG8.618e-1834.57Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_MACMU8.618e-1833.95Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA8.618e-1833.95Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189273 ID=CN189273; Name=CN189273; organism=Citrus sinensis; type=EST; length=674bp
GAGGTAATCATTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCA
TCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGAC
TCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGAC
CTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCC
GTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAG
CTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAA
TCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGA
GCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCT
GCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAAC
GAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTC
ACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCT
TACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGT
AGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCAT
CCCAAGCCTTTGAATACATCAAAG
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