CN189273

Overview
NameCN189273
Unique NameCN189273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26
Identity = 62/165 (37.58%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  191 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            S+  F  +YG+ Y   +E   R   F +N  LI   N+K     +++++ +N+F D + EEF     G  +      K      A  +    DWR   +V+PVKDQ  CGSCW FS TG+LE  +     + +SLSEQQLVDC+  + N GC GG  + AF+YIK
Sbjct:   19 SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIK 183          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26
Identity = 67/163 (41.10%), Postives = 92/163 (56.44%), Query Frame = 2
Query:  197 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            A   R YG     + E + R A + KN  +I   N++       +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   AF+YIK
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIK 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26
Identity = 66/163 (40.49%), Postives = 90/163 (55.21%), Query Frame = 2
Query:  197 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            A   R YG     + E   R A + KN+ +I   NR+       + + +N F D + EEF++   G         K   +     +P++ DWRE G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N+GCNGGL   AF Y+K
Sbjct:   34 ATHRRLYG-----MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVK 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26
Identity = 67/163 (41.10%), Postives = 92/163 (56.44%), Query Frame = 2
Query:  197 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            A   R YG     + E + R A + KN  +I   N++       +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   AF+YIK
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIK 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.583e-26
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  212 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   LG     + T   N        VLP   DWR +G V  +K QG CG CW FS   ++E       G  ISLSEQ+L+DC +  N +GCNGG  +  F++I
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFI 203          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.598e-26
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  242 EMKLRFATFSKNLDLIRSTNRKGLS---YRLGLNKFADWSWEEFQRHRLGA--AQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            E + RF  F  NL  + + N +      +RLG+N+FAD + EEF+   LGA  A+   A  +       + LPE+ DWRE G V+PVK+QG CGSCW FS   ++E+      G+ I+LSEQ+LV+C+    N GCNGGL   AF++I
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFI 217          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.123e-25
Identity = 65/163 (39.88%), Postives = 92/163 (56.44%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLT---ADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  +  ++ KIY++++E   RF  F  NL  I  TN+K  SY LGLN FAD S +EF+    G+      TT+ +++      DV +PE  DWR+ G V+PVK+QG CGSCW FS   ++E       G     SEQ+L+DC +   + GCNGG P  A + +
Sbjct:   48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSALQLV 208          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.123e-25
Identity = 64/164 (39.02%), Postives = 90/164 (54.88%), Query Frame = 2
Query:  188 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            + FA F ++YGK+Y+  +E   RF  F +N++  +           G+  F+D + EEF+ R+R GA+   +A  +      +T    P   DWRE G V+PVK QG CGSCW FST G++E  +  A    +SLSEQ LV C     + GCNGGL   AF +I
Sbjct:   39 MRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTI--DSGCNGGLMDNAFNWI 200          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.467e-25
Identity = 68/157 (43.31%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  218 GKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSP-VKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            GK Y  + E + RF  F  NL  I   N     SY  GLNKF+D + +EFQ   LG     ++ S   +       DVLP+  DWRE G V P VK QG CGSCW F+ TG++E       G+ +SLSEQ+L+DC +  +N GC GG    AFE+IK
Sbjct:   49 GKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIK 205          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.915e-25
Identity = 65/162 (40.12%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL-------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            R +  +  S+ E   RF  F  N+  + +TN+    Y+L LNKFAD +  EF+    G+  N     +G+   +   +       P + DWR+ G V+ VKDQG CGSCW FST  ++E        K +SLSEQ+LVDC +   NQGCNGGL   AFE+IK
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKE-ENQGCNGGLMESAFEFIK 204          
The following BLAST results are available for this feature:
BLAST of CN189273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CYSP3_HOMAM5.041e-2637.58Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL2_BOVIN5.041e-2641.10Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_CANFA5.041e-2640.49Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL1_BOVIN5.041e-2641.10Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
ACTN_ACTDE6.583e-2640.38Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ORYB_ORYSJ8.598e-2642.57Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
PAPA1_CARPA1.123e-2539.88Papain OS=Carica papaya PE=1 SV=1[more]
CYSP_TRYBB1.123e-2539.02Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CPR2_ARATH1.467e-2543.31Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSEP_VIGMU1.915e-2540.12Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189273 ID=CN189273; Name=CN189273; organism=Citrus sinensis; type=EST; length=674bp
GAGGTAATCATTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCA
TCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGAC
TCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGAC
CTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCC
GTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAG
CTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAA
TCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGA
GCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCT
GCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAAC
GAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTC
ACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCT
TACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGT
AGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCAT
CCCAAGCCTTTGAATACATCAAAG
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