CN189273

Overview
NameCN189273
Unique NameCN189273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 62/163 (38.04%), Postives = 90/163 (55.21%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            + ++   + ++Y   EE   R A + KN+ +I   N++      S+ + +N F D + EEF++   G         K   +      P + DWRE G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N+GCNGGL   AF+Y+
Sbjct:   29 WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYV 190          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24
Identity = 65/151 (43.05%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  242 EMKLRFATFSKNLDLIRSTNRKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            E   RF TF  N   I S N++G   YRL LN+F D    EF+   +G  +  + +   +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIK 210          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNHKLTADVL--PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            FA F +++G++YES  E   R + F +NL L R           G+  F+D + EEF+ R+  GAA   +A  +    +  +V+  P   DWR  G V+ VKDQG CGSCW FS  G++E  +  A     +LSEQ LV C +   + GC+GGL + AFE+I
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWI 197          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 65/151 (43.05%), Postives = 81/151 (53.64%), Query Frame = 2
Query:  242 EMKLRFATFSKNLDLIRSTNRKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            E   RF TF  N   I S N++G   YRL LN+F D    EF+   +G  +  +     +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIK 210          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 2
Query:  443 PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            P + DWRE G V+PVKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC++   NQGCNGGL  QAF+Y++
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQ 78          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 2
Query:  221 KIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN---HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            ++Y + EE   R A + KN+ +I   N +       + + +N F D + EEF R  +G  +N     KG      L  D LP++ DWR+ G V+PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   NQGCNGG  ++AF+Y+K
Sbjct:   38 RLYGANEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEF-RQMMGCFRN-QKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVK 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 64/155 (41.29%), Postives = 90/155 (58.06%), Query Frame = 2
Query:  221 KIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            ++Y + EE + R A + KN+ +I+  N +  +    + + +N F D + EEF++   G         +   +     +P++ DWRE G V+PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  NQGCNGGL   AF+YIK
Sbjct:   38 RLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23
Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 2
Query:  221 KIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLG----LNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            ++Y + EE + R A + KN+ +I+  N +  + + G    +N F D + EEF++   G         +   +     +P+T DWRE G V+PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+    NQGCNGGL   AF+YIK
Sbjct:   38 RLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIK 191          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23
Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIR--STNRKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK-GNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  +   +G++Y + EE   R   F  N + IR  + NRK   S+RLGLNKFAD + +EF +  L A ++ S   K  N K+     + D  P + DWR+ G+++ VK QG CG  W FS TG++EAA+  A G  +SLSEQ+LVDC +   ++G   G   Q+FE++
Sbjct:   44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVE--ESEGSYNGWQYQSFEWV 209          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.342e-23
Identity = 64/162 (39.51%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  188 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            ++F ++A  + K++ +  E   RFA F  N   + +      +    LN FAD + EEF +  LG       TT  N K      PE+ DWR   I++P KDQG CGSCWTF TT  LE   ++  GK  S SEQQLVDC  + N  GC GG PS + ++I+
Sbjct:   16 VAFKQWAATHNKVFANRAEYLYRFAVFLDNKKFVEA------NANTELNVFADMTHEEFIQTHLGMTYEVPETTS-NVKAAVKAAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDN--GCEGGHPSNSLKFIQ 166          
The following BLAST results are available for this feature:
BLAST of CN189273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATL1_CERAE2.766e-2438.04Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CYSP2_HORVU4.718e-2443.05Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP_TRYCR6.162e-2438.89Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSP1_HORVU6.162e-2443.05Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATL1_CHICK6.162e-2462.34Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATL2_HUMAN8.048e-2441.77Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL1_MOUSE8.048e-2441.29Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_RAT1.051e-2341.94Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
P34_SOYBN1.793e-2339.88P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
ACP1_ENTHI2.342e-2339.51Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189273 ID=CN189273; Name=CN189273; organism=Citrus sinensis; type=EST; length=674bp
GAGGTAATCATTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCA
TCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGAC
TCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGAC
CTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCC
GTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAG
CTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAA
TCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGA
GCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCT
GCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAAC
GAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTC
ACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCT
TACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGT
AGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCAT
CCCAAGCCTTTGAATACATCAAAG
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