DR908627

Overview
NameDR908627
Unique NameDR908627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_SOLLC (ATP synthase subunit a, chloroplastic OS=Solanum lycopersicum GN=atpI PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.032e-45
Identity = 94/117 (80.34%), Postives = 97/117 (82.91%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS+AYFYAGL+K+GLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSVAYFYAGLTKRGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_PHAAO (ATP synthase subunit a, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=atpI PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.032e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALAL TS+AYFYAGL KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALPTSVAYFYAGLRKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_JASNU (ATP synthase subunit a, chloroplastic OS=Jasminum nudiflorum GN=atpI PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.032e-45
Identity = 94/117 (80.34%), Postives = 97/117 (82.91%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS+AYFYAGL+K+GL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSVAYFYAGLTKRGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_WHEAT (ATP synthase subunit a, chloroplastic OS=Triticum aestivum GN=atpI PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_SORBI (ATP synthase subunit a, chloroplastic OS=Sorghum bicolor GN=atpI PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_SACOF (ATP synthase subunit a, chloroplastic OS=Saccharum officinarum GN=atpI PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_SACHY (ATP synthase subunit a, chloroplastic OS=Saccharum hybrid GN=atpI PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_ORYSJ (ATP synthase subunit a, chloroplastic OS=Oryza sativa subsp. japonica GN=atpI PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_ORYSI (ATP synthase subunit a, chloroplastic OS=Oryza sativa subsp. indica GN=atpI PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of DR908627 vs. ExPASy Swiss-Prot
Match: ATPI_ORYSA (ATP synthase subunit a, chloroplastic OS=Oryza sativa GN=atpI PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 95/117 (81.20%), Postives = 96/117 (82.05%), Query Frame = 3 
Query:    3 TNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 353
            TNDINTTVALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  131 TNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
The following BLAST results are available for this feature:
BLAST of DR908627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
ATPI_SOLLC1.032e-4580.34ATP synthase subunit a, chloroplastic OS=Solanum l... [more]
ATPI_PHAAO1.032e-4581.20ATP synthase subunit a, chloroplastic OS=Phalaenop... [more]
ATPI_JASNU1.032e-4580.34ATP synthase subunit a, chloroplastic OS=Jasminum ... [more]
ATPI_WHEAT1.760e-4581.20ATP synthase subunit a, chloroplastic OS=Triticum ... [more]
ATPI_SORBI1.760e-4581.20ATP synthase subunit a, chloroplastic OS=Sorghum b... [more]
ATPI_SACOF1.760e-4581.20ATP synthase subunit a, chloroplastic OS=Saccharum... [more]
ATPI_SACHY1.760e-4581.20ATP synthase subunit a, chloroplastic OS=Saccharum... [more]
ATPI_ORYSJ1.760e-4581.20ATP synthase subunit a, chloroplastic OS=Oryza sat... [more]
ATPI_ORYSI1.760e-4581.20ATP synthase subunit a, chloroplastic OS=Oryza sat... [more]
ATPI_ORYSA1.760e-4581.20ATP synthase subunit a, chloroplastic OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16755 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-33_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908627 ID=DR908627; Name=DR908627; organism=Citrus sinensis; type=EST; length=604bp
CCACGAATGATATAAATACTACCGTTGCTTTAGCTTTGCTCACGTCAATA
GCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAGGCTATTTCAGTAA
ATACATTCAACCGACTCCAATTCTTTTACCCATTAACATTTTAGAAGATT
TCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGGGAATATATTAGCC
GATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTGGTTCC
TATACCCGTCATGTTCCTTGGATTATTTACAAGCGGTATTCAAGCTCTTA
TTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATCTATGGAGGGACAT
CATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCTTAGAACAAAGGCA
ATGGATGCGTAACTCAAGATAATCTACTTATACTTCTACTTAGGAAAAAT
ACATATCCAAACATAAATCTACAAATACCGCATATACGATCAAGAGTCGT
AGAAAAAAAATTACGATATTGGGGAATTGTAGGAAAGAGATCTAAAGGAT
CTTTTTCCTCAAATTCCTCTTTGGCCTTATTATATCATCCCCCCCTCTCC
CCGC
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