DR908624

Overview
NameDR908624
Unique NameDR908624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14
Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 3
Query:  147 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            G++  CS     +V     L    T    ++ I     +  N  GE +I C  I ++P++ FTI    + LSP  YIL+  +     C SGF   D+P   G LWILGDVF+  Y+TVFD    ++G A  A
Sbjct:  260 GETIACSGGCQAIVDTGTSLLTGPTS--AIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTINGVQYPLSPSAYILQDDDS----CTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 385          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14
Identity = 43/65 (66.15%), Postives = 46/65 (70.77%), Query Frame = 3
Query:  348 IFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            +F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  205 VFGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 265          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.726e-14
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 3
Query:  288 IIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 539
            +++C ++PT+P++SF +G + + LS   Y+ K      ++CI      D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  318 VVNCSQVPTLPDISFYLGGRTYTLSNMDYVQKNPFRNDDLCILALQGLDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.726e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  351 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  207 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 266          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.726e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  351 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  222 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 281          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.726e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  351 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  165 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 224          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.062e-14
Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 3
Query:  279 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 539
            GE  ++C  +  MP+V+F I    + LS   Y L       + C SGF   D+ PP GPLWILGDVF+  +++VFD G  R+G A A
Sbjct:  308 GEYAVECENLNIMPDVTFVINGVPYTLSATAYTLPDFVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRQFYSVFDRGSNRVGLAPA 394          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13
Identity = 49/134 (36.57%), Postives = 68/134 (50.75%), Query Frame = 3
Query:  147 GDSAVCSACEMTVVWVQNQLKQKQTK--EKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            G++  C+     VV     L    T    K+ SYI     +  N +GE+II C  I ++P++ FTI +  + L    YILK  +     C+SGF   +L    G LWILGDVF+  Y TVFD    ++G A AA
Sbjct:  262 GETIACADSCQAVVDTGTSLLAGPTSAISKIQSYIG----ASKNLLGENIISCSAIDSLPDIVFTINNVQYPLPASAYILKEDDD----CLSGFDGMNLDTSYGELWILGDVFIRQYFTVFDRANNQVGLAAAA 387          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13
Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 3
Query:  147 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            G +  CS     +V     L         ++ I +   +  N  G+ ++ C  I ++P++ FTI    + L    YIL+  +     C SGF   D+P P G LWILGDVF+  Y  VFD G  R+G A  A
Sbjct:  262 GQAIACSGSCQAIVDTGTSLLSGPNN--AIANIQKSIGASQNANGQMVVSCSSIQSLPDIVFTINGIQYPLPASAYILQNQQD----CTSGFQGMDIPTPSGELWILGDVFIRQYFAVFDRGNNRVGLAPVA 387          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 3
Query:  147 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            G +  CS     +V     L    T    ++ I     +  N  G+ +I C  I ++P++ FTI    + L P  YIL++ +G    C+SGF   +LP   G LWILGDVF+  Y  VFD    ++G A  A
Sbjct:  261 GQAIACSDGCQAIVDTGTSLLAGPTN--AIANIQSYIGASQNSYGQMVISCSAINSLPDIVFTINGIQYPLPPSAYILQSQQG----CVSGFQGMNLPTASGELWILGDVFIRQYFAVFDRANNQVGLAPVA 386          
The following BLAST results are available for this feature:
BLAST of DR908624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PEPA_PIG2.122e-1434.85Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
CARDH_CYNCA2.122e-1466.15Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
RENI_RAT4.726e-1438.10Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
CARDG_CYNCA4.726e-1467.19Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDF_CYNCA4.726e-1467.19Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDE_CYNCA4.726e-1467.19Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CATE_RABIT8.062e-1442.53Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
PEPA1_RABIT1.053e-1336.57Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA_SUNMU1.375e-1332.58Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA_CANFA1.375e-1333.33Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16752 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-44_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908624 ID=DR908624; Name=DR908624; organism=Citrus sinensis; type=EST; length=605bp
AGTATGGGGATTTAATATGGGATCTCTTAGTATCAGGGCTACTACCTGAG
AAAGTATGTCAGCAGATTGGTTTATGTGCTTTCAATGGCGCTGAATATGT
GAGTACTGGGATCAAGACCGTGGTTGAGAAGGAAAACGTATCAGCCGGGG
ATAGTGCTGTGTGCAGTGCTTGTGAAATGACCGTGGTTTGGGTCCAGAAT
CAGCTAAAACAAAAGCAAACAAAGGAGAAAGTACTCAGTTATATAAATGA
GCTCTGCGACAGCCTGCCAAATCCGATGGGAGAATCAATTATTGACTGTG
GTCGCATTCCAACCATGCCAAATGTTTCATTCACCATCGGAGACAAAATT
TTCAACCTCTCTCCAGAGCAGTATATTCTGAAAACCGGAGAAGGGATTGC
AGAAGTCTGCATCAGTGGCTTCATGGCTTTCGACCTGCCTCCTCCAAGGG
GTCCTCTGTGGATTCTGGGAGATGTATTCATGGGGGTTTATCACACTGTT
TTCGACTCTGGTAAGCTCCGGATCGGCTTTGCTGAGGCTGCGTAATGATC
TACTTACTGTCAGTTTTTATGTAGTAGCAGCGATCATCACCTGCTCATAT
GAGGA
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