DR908619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908619 vs. ExPASy Swiss-Prot
Match: U1SBP_BOVIN (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus GN=SNRNP35 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.017e-16 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 9 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 269 TLFVARL+ +T E K+K F YG I+R+RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+ W PR Sbjct: 52 TLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
BLAST of DR908619 vs. ExPASy Swiss-Prot
Match: U1SBP_MOUSE (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus musculus GN=Snrnp35 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.329e-16 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 9 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 269 TLFVARL+ +T E K+K F YG I+R+RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+ W PR Sbjct: 52 TLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAYRDADGLVIDQHEIFVDYELERTLRGWIPR 138
BLAST of DR908619 vs. ExPASy Swiss-Prot
Match: U1SBP_RAT (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus GN=Snrnp35 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 9 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 269 TLFVARL+ +T E K+K F YG I+R+RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+ W PR Sbjct: 52 TLFVARLNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPR 138
BLAST of DR908619 vs. ExPASy Swiss-Prot
Match: U1SBP_HUMAN (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens GN=SNRNP35 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 9 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 269 TLFVARL+ +T E K+K F YG I+R+RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+ W PR Sbjct: 52 TLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
BLAST of DR908619 vs. ExPASy Swiss-Prot
Match: U1SBP_XENLA (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Xenopus laevis GN=snrnp35 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.292e-15 Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 9 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 269 TLFV+RLS +TTE K+K F YG IKR+RLV D T +GYAFIEY + A++ A+ +D R V VD E R + W PR Sbjct: 52 TLFVSRLSPQTTEEKLKEVFSRYGDIKRIRLVRDFITGFSKGYAFIEYKQENAIMKAHRDANKLVIDQREVFVDFELERNLKGWIPR 138
BLAST of DR908619 vs. ExPASy Swiss-Prot
Match: RU17_YEAST (U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Saccharomyces cerevisiae GN=SNP1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.064e-13 Identity = 36/92 (39.13%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 3 YKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPR 269 Y+T+F+ RL Y+ E ++++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ R +VD+ERGRTV ++PR Sbjct: 106 YRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIVDIERGRTVKYFKPR 197 The following BLAST results are available for this feature:
BLAST of DR908619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908619 ID=DR908619; Name=DR908619; organism=Citrus sinensis; type=EST; length=605bpback to top |