DR908617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP1_RAT (Cysteine and glycine-rich protein 1 OS=Rattus norvegicus GN=Csrp1 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 45/164 (27.44%), Postives = 75/164 (45.73%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY +++ + +HK+CF C CK L + +YC+ + + + G GT + K E L N NA K + K +G ++C C + VY EKV G ++H+SCF+C+ G + + +G++YCK + + F KG Sbjct: 17 VYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSMDKGESLGIKHEEAPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKG 179
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: LIMA1_HUMAN (LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 43/130 (33.08%), Postives = 64/130 (49.23%), Query Frame = 3 Query: 192 PKIVKPEKLVEN---ENAQKVSNKFVG-TRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQ----------LESDLEKSQISEKPTPVQIAAES 539 PK + P+ + + K KF R+ CV C +TVYP E++ N +H SCF+CS+ +S Y + G++YCK H QLF+ KGNY + S E +I E+P + A E+ Sbjct: 358 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARET 487 HSP 2 Score: 68.5514 bits (166), Expect = 2.867e-11 Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTP 194 VY +++L A+ +V+H +CFRC +C L L + S G +YC+PHF+QLFK G+ ++ F P Sbjct: 397 VYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRP 460
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP1_MOUSE (Cysteine and glycine-rich protein 1 OS=Mus musculus GN=Csrp1 PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 45/164 (27.44%), Postives = 74/164 (45.12%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY +++ + +HK+CF C CK L + +YC+ + + + G GT K E L N NA K + K +G ++C C + VY EKV G ++H+SCF+C+ G + + +G++YCK + + F KG Sbjct: 17 VYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKG 179
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP1_COTJA (Cysteine and glycine-rich protein 1 OS=Coturnix coturnix japonica GN=CSRP1 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 46/163 (28.22%), Postives = 75/163 (46.01%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL-----------VENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY +++ + +HK+CF C CK L + +YC+ + + + G GT K E L N NA +++ K VG D C C + VY EKV G ++H+SCF+C+ G ++ + +G++YCK + + F KG Sbjct: 17 VYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPKGYGYGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQK-VGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKG 178
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP1_CHICK (Cysteine and glycine-rich protein 1 OS=Gallus gallus GN=CSRP1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 46/163 (28.22%), Postives = 75/163 (46.01%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL-----------VENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY +++ + +HK+CF C CK L + +YC+ + + + G GT K E L N NA +++ K VG D C C + VY EKV G ++H+SCF+C+ G ++ + +G++YCK + + F KG Sbjct: 17 VYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPKGYGYGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQK-VGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKG 178
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP3_BOVIN (Cysteine and glycine-rich protein 3 OS=Bos taurus GN=CSRP3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13 Identity = 48/180 (26.67%), Postives = 83/180 (46.11%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTG----------------SLEKSFEGTPKIVKPEKLVENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG-NYSQLESDLEK 491 VY +++ + R +HK CF C C+ L + + E +YC+ + + + G L F+ +PK + + N K + KF G +KC C ++VY EKV G +H++CF+C+ G ++ +N +G+LYCK + + F G + L +EK Sbjct: 17 VYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPK--QARSATTSSNPSKFA-KF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKNFGPTGIGFGGLTHQVEK 192
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: XIRP2_MOUSE (Xin actin-binding repeat-containing protein 2 OS=Mus musculus GN=Xirp2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.346e-13 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSF 182 VY ++ L AD + +HK+CFRCHHC L L N+ S G +YC+PHF QLFK G+ ++ F Sbjct: 3264 VYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSKGNYDEGF 3323 HSP 2 Score: 74.7146 bits (182), Expect = 4.001e-13 Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 222 ENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQ 470 E A + + F+ ++ C+ C +TVYP E + + +H+SCF+C H +S NY + G++YCK H QLF+ KGNY + Sbjct: 3239 EMSRAFQEESAFLSDKEICIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSKGNYDE 3321
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP1_PONAB (Cysteine and glycine-rich protein 1 OS=Pongo abelii GN=CSRP1 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.346e-13 Identity = 44/164 (26.83%), Postives = 74/164 (45.12%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY +++ + +HK+CF C CK L + +YC+ + + + G GT K E L N NA K + K +G ++C C + VY EKV G ++H++CF+C+ G + + +G++YCK + + F KG Sbjct: 17 VYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEESPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKG 179
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP1_HUMAN (Cysteine and glycine-rich protein 1 OS=Homo sapiens GN=CSRP1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.346e-13 Identity = 44/164 (26.83%), Postives = 74/164 (45.12%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY +++ + +HK+CF C CK L + +YC+ + + + G GT K E L N NA K + K +G ++C C + VY EKV G ++H++CF+C+ G + + +G++YCK + + F KG Sbjct: 17 VYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQK-IGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKG 179
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CSRP1_BOVIN (Cysteine and glycine-rich protein 1 OS=Bos taurus GN=CSRP1 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.346e-13 Identity = 45/164 (27.44%), Postives = 74/164 (45.12%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPEKL------------VENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY +++ + +HK+CF C CK L + +YC+ + + + G GT + K E L N N K + K VG ++C C + VY EKV G ++H+SCF+C+ G + + +G++YCK + + F KG Sbjct: 17 VYFAEEVQCEGSSFHKSCFLCLVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSMDKGESLGIRHEEAPGHRPTTNPNTSKFAQK-VGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKG 179 The following BLAST results are available for this feature:
BLAST of DR908617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908617 ID=DR908617; Name=DR908617; organism=Citrus sinensis; type=EST; length=605bpback to top |