DR908617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: LIMA1_MOUSE (LIM domain and actin-binding protein 1 OS=Mus musculus GN=Lima1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.064e-13 Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 3 Query: 192 PKIVKPEKLVEN---ENAQKVSNKFVG-TRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQ 470 PK + P+ + + K + KF ++ CV C +TVYP E++ N +H SCF+CS+ +S Y + G++YCK H QLF+ KGNY + Sbjct: 356 PKPLSPDARTSSLPESSPSKTAKKFQAPAKESCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDE 452 HSP 2 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSF 182 VY +++L A+ +V+H +CFRC +C L L + S G +YC+PHF+QLFK G+ ++ F Sbjct: 395 VYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGF 454
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CRIP2_BOVIN (Cysteine-rich protein 2 OS=Bos taurus GN=CRIP2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13 Identity = 51/176 (28.98%), Postives = 77/176 (43.75%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYC-RPHFDQLFKRTGS---------LEKSFEGTPKIVKP-EKLVENENAQKVSNK------------FVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYC-KHHHIQLFREKG 458 VY +K+++ + +H+ C RC HC TL +G +C +P + LF G EK P++ P E V +K S F G + C C++ VY EKV+ G +HR C +C G T++P + H+G+ YC K + LF KG Sbjct: 12 VYFAEKVSSLGKDWHRFCLRCEHCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPSAEKPQVTGPIEVPVARTEERKASGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: LIMC_DICDI (LIM domain-containing protein C OS=Dictyostelium discoideum GN=limC PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.546e-12 Identity = 42/163 (25.77%), Postives = 68/163 (41.72%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRT-----GSLEKSFEGTPKIVKPEKLVEN------ENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 458 VY + + A + YHK C +C HC L+L ++ +G YC+ +D+LF++ G + SFE PK+ + ++V + T C C + Y E N +H++CF C + Y EG +YC + F G Sbjct: 12 VYAAEAVKACEKQYHKLCLQCFHCHKILQLGQYSERDGQPYCKTDYDRLFRQAGYRGGGVVADSFEPAPKVETTTPVEPTPPPTFLTPTEEVKVQLFPT--NCPKCGKKAYFNELKVYNSRDWHKTCFACFSCNKNLVSGQYSEKEGLIYCPRCYQSKFGPSG 172
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: LIMD2_RAT (LIM domain-containing protein 2 OS=Rattus norvegicus GN=Limd2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 3 Query: 267 RDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQ 470 ++ C C +TVYP E++ + +H SCF C H +S +Y A G+ YCK H QLF+ KGNY + Sbjct: 38 KETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCKPHFQQLFKSKGNYDE 105
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: LIMD2_HUMAN (LIM domain-containing protein 2 OS=Homo sapiens GN=LIMD2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 3 Query: 267 RDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQ 470 ++ C C +TVYP E++ + +H SCF C H +S +Y A G+ YCK H QLF+ KGNY + Sbjct: 37 KETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDE 104
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CRIP2_HUMAN (Cysteine-rich protein 2 OS=Homo sapiens GN=CRIP2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 49/176 (27.84%), Postives = 74/176 (42.05%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYC-RPHFDQLFKRTGS---------LEKSFEGTPKIVKP-EKLVENENAQKVSNK------------FVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYC-KHHHIQLFREKG 458 VY +K+++ + +HK C +C C TL +G +C +P + LF G EK P++ P E +K S F G + C C + VY EKV+ G +HR C +C G T++P + H+G+ YC K + LF KG Sbjct: 12 VYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: LIMD2_BOVIN (LIM domain-containing protein 2 OS=Bos taurus GN=LIMD2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.681e-11 Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 3 Query: 267 RDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQ 470 ++ C C +TVYP E++ + +H SCF C H +S +Y A G+ YCK H QLF+ KGNY + Sbjct: 38 KETCAACQKTVYPMERLVADKLIFHSSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDE 105
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: LIMD2_MOUSE (LIM domain-containing protein 2 OS=Mus musculus GN=Limd2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.195e-11 Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 3 Query: 267 RDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQ 470 ++ C C +TVYP E++ + +H SCF C H +S +Y A G+ YC+ H QLF+ KGNY + Sbjct: 38 KETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCRPHFQQLFKSKGNYDE 105 HSP 2 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEKSF 182 VY +++L AD ++H +CF C HC L L ++ + G YCRPHF QLFK G+ ++ F Sbjct: 48 VYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCRPHFQQLFKSKGNYDEGF 107
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CRIP2_MOUSE (Cysteine-rich protein 2 OS=Mus musculus GN=Crip2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11 Identity = 49/176 (27.84%), Postives = 75/176 (42.61%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYC-RPHFDQLFKRTGS---------LEKSFEGTPKIVKP-EKLVENENAQKVSNK------------FVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYC-KHHHIQLFREKG 458 VY +K+++ + +HK C +C C TL +G +C +P + LF G EK P++ P E V +K S F G + C C++ VY EKV+ G +HR C +C T++P + H+G+ YC K + LF KG Sbjct: 12 VYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPQTEAPQVTGPIEVPVVRTEERKTSGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCSKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
BLAST of DR908617 vs. ExPASy Swiss-Prot
Match: CRIP2_RAT (Cysteine-rich protein 2 OS=Rattus norvegicus GN=Crip2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.745e-11 Identity = 49/176 (27.84%), Postives = 75/176 (42.61%), Query Frame = 3 Query: 3 VYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYC-RPHFDQLFKRTGS---------LEKSFEGTPKIVKP-EKLVENENAQKVSNK------------FVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYC-KHHHIQLFREKG 458 VY +K+++ + +HK C +C C TL +G +C +P + LF G EK P++ P E V +K S F G + C C++ VY EKV+ G +HR C +C T++P + H+G+ YC K + LF KG Sbjct: 12 VYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPPTEAPQVTGPIEVPVVRTEERKTSGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCSKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187 The following BLAST results are available for this feature:
BLAST of DR908617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908617 ID=DR908617; Name=DR908617; organism=Citrus sinensis; type=EST; length=605bpback to top |