EY756760

Overview
NameEY756760
Unique NameEY756760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length419
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_ANASP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena sp. (strain PCC 7120) GN=dxr PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.828e-17
Identity = 40/69 (57.97%), Postives = 54/69 (78.26%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWARE 218
            AYAAGRAGG+M  VL+AANE+ V +F+DEKI +LDI + +EL CD+H+ D   +PSL+DI+  D WAR+
Sbjct:  312 AYAAGRAGGSMPAVLNAANEQVVALFLDEKIKFLDIPRCIELVCDRHQNDNCANPSLDDILAADQWARQ 380          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_SYNP6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 38/70 (54.29%), Postives = 55/70 (78.57%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWAREY 221
            AYAAGR GGTM  VL+AANE+AV +F++E+I + DI +++E  CD+H+ +    PSL+DI+ YDAWAR++
Sbjct:  321 AYAAGRKGGTMPAVLNAANEQAVALFLEEQIHFSDIPRLIERACDRHQTEWQQQPSLDDILAYDAWARQF 390          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_SYNE7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus elongatus (strain PCC 7942) GN=dxr PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 38/70 (54.29%), Postives = 55/70 (78.57%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWAREY 221
            AYAAGR GGTM  VL+AANE+AV +F++E+I + DI +++E  CD+H+ +    PSL+DI+ YDAWAR++
Sbjct:  321 AYAAGRKGGTMPAVLNAANEQAVALFLEEQIHFSDIPRLIERACDRHQTEWQQQPSLDDILAYDAWARQF 390          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_SYNSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9605) GN=dxr PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.318e-17
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWAR 215
            AYAAG AGGTM  V++AANE+AV  F++EKI +LDI  V+E  C++HK DL+  P L+D++  D WAR
Sbjct:  327 AYAAGSAGGTMPAVMNAANEEAVAQFLEEKIHFLDIPTVIEAACERHKPDLMAQPQLDDVLRVDQWAR 394          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_PROMA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus GN=dxr PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWAR 215
            AYAAG+A GTM  VL+AANE+AV +F++EKI +L+I KV+E  C+ HK DL   P L+D+I  D WAR
Sbjct:  324 AYAAGKAAGTMPAVLNAANEEAVALFLEEKIHFLNIPKVIEAACENHKKDLKFDPQLQDVIEVDYWAR 391          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_NOSP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWARE 218
            AYA G+AGG+M  VL+AANE+AV +F+DEKI +LDI + +E  CD+H+ D   +PSL+DI+  D WAR+
Sbjct:  311 AYAVGKAGGSMPAVLNAANEQAVALFLDEKIRFLDIPRCIEWVCDRHQNDNRANPSLDDILAADKWARQ 379          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_CYAA5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.502e-16
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWARE 218
            AYAAG AGG M  VL+AANE+AV +F+ EKI +LDI KV+E TCD  +    + PSLEDI+  D WARE
Sbjct:  311 AYAAGNAGGAMPAVLNAANEQAVALFLAEKIAFLDIPKVIEKTCDNFRDHNRSQPSLEDILEADKWARE 379          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_THEEB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxr PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWAREYAAGLQFSSGRSPVPA 266
            AYAAGRAGG M  VL+AANE+AV +FI E I +L+I +++E+ CD++ A  + +P+LEDI+  D WAR     L    G SP+ A
Sbjct:  329 AYAAGRAGGAMPAVLNAANEQAVALFIAEAIAFLEIPRLIEMVCDRYSAQNIPNPTLEDILAADRWARATVQELA-QRGVSPMVA 412          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_MICAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Microcystis aeruginosa (strain NIES-843) GN=dxr PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWARE 218
            AYAAGRAGG M  VL+AANE+AV +F++EKI +LDI +V+E  CD+      ++PSL+DI+  D WAR+
Sbjct:  311 AYAAGRAGGAMPAVLNAANEQAVALFLEEKISFLDIPRVIEKVCDRFAIHNTSTPSLDDILAADNWARQ 379          
BLAST of EY756760 vs. ExPASy Swiss-Prot
Match: DXR_ACAM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 3
Query:   12 AYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWAREYAAGLQFSSGRSPV 260
            AY  GR GG M  V++AANE+AV +F++EKI +LDI KV+E  CD++++     PSLEDI+  D WAR+    L  S  ++PV
Sbjct:  311 AYDVGRMGGAMPAVMNAANEQAVALFLEEKISFLDIPKVIETACDRYQSQNTLQPSLEDILAADQWARQEI--LTISQSQTPV 391          
The following BLAST results are available for this feature:
BLAST of EY756760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
DXR_ANASP1.828e-1757.971-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNP63.118e-1754.291-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNE73.118e-1754.291-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNSC5.318e-1755.881-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROMA1.547e-1657.351-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_NOSP73.447e-1655.071-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CYAA54.502e-1659.421-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_THEEB1.310e-1549.411-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_MICAN1.310e-1555.071-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_ACAM11.310e-1548.191-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-D03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756760 ID=EY756760; Name=EY756760; organism=Citrus sinensis; type=EST; length=419bp
CCACGCGTCCGGCCTATGCTGCTGGACGGGCTGGAGGCACCATGACAGGA
GTTCTTAGTGCAGCTAACGAGAAAGCAGTAGAGATGTTCATTGATGAAAA
GATTGGCTATCTGGATATTTTCAAGGTTGTGGAGCTAACGTGTGATAAGC
ACAAGGCGGACTTGGTAACCTCGCCTTCCCTAGAGGATATAATACATTAT
GATGCATGGGCACGAGAGTATGCAGCTGGTTTGCAATTTTCATCTGGTAG
AAGCCCTGTTCCAGCATGACTGCTTGCATTGATGCCCTACTTTGAGAACT
AGAGAGATGTGTTTACTTTTTGCCAAAAACTGGTATTCTCGTCAATGTTT
AAAGAGGCATCGAGCAATTGTACCATAAATAAATATAAGGTGGGGATTCA
GTATGTGTCCCCGATTTTN
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