EY756669

Overview
NameEY756669
Unique NameEY756669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM1_SOLTU (Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.039e-14
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEDCSR 154
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+  R
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVR 144
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALN_CHICK (Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:   90 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 130
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_XENLA (Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_TORCA (Calmodulin OS=Torpedo californica PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_STRPU (Calmodulin (Fragment) OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:   32 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 72
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:  108 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 148
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_SHEEP (Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_SACJA (Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYE+
Sbjct:  101 ISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEE 141
[Close]
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
The following BLAST results are available for this feature:
BLAST of EY756669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
CALM1_SOLTU2.039e-1484.09Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=... [more]
CALN_CHICK2.662e-1487.80Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV... [more]
CALM_XENLA2.662e-1487.80Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2[more]
CALM_TORCA2.662e-1487.80Calmodulin OS=Torpedo californica PE=1 SV=2[more]
CALM_STRPU2.662e-1487.80Calmodulin (Fragment) OS=Strongylocentrotus purpur... [more]
CALM_STRIE2.662e-1487.80Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_STIJA2.662e-1487.80Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_SHEEP2.662e-1487.80Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3[more]
CALM_SACJA2.662e-1487.80Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1[more]
CALM_RENRE2.662e-1487.80Calmodulin OS=Renilla reniformis PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-C11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756669 ID=EY756669; Name=EY756669; organism=Citrus sinensis; type=EST; length=797bp
TCCGAACGACCCACGCGTCCGCATCTCTTCTCCTGAGCTGCGCCATGTGA
TGACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATA
AGGGAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGATTGCAG
CAGATAAACNATGCCCCAAANATTGACCCCAACCCACCATCACTAAGAGG
TGGGGNNGCTAATATAGGAAGGGGATCCCTATTTTCCTCTCTTACAATTT
TTACTTTGATAGNCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAA
TGGTGATGGGCCTGATGGTGTATGAAGAATGCTGTCTCCCCTCATCATAT
GTCTTGCGACTCCCAAAACTTTTCGGGTTTTATATTCTAATTAGTCTGCC
GTCCAATAAAGCTGGTGCCGGGTTATGGGCTTCCTTAATTCCAAAAAAAA
AAAAAAAAAGGGGCCCCCCTAAAGATCCAAACTTTCGACCCCGGATGGCA
CCTCTTACCTTCTCCTTTGGCCCCCAAATCAATGCCCGGCCCCCCTTTAA
CACCCCGGAAGGAAAAAACCGGGGGCCCCCCTATTAAACCCCTGGGAAAA
ACCCCCCTTTTCCCCGGTGGGGAAAACAAAAAGAGCCCCCCAATTTCCCC
CTCCCAAGTTTTCCCCCCCTTTATGGAGAAAAGACCCCCCCCTTACACAC
AAATTAAACGCGGGGGGTGTGGGTTTCCCCCCCGGGAGCATACTATTTAA
GGGGCCCATACCCCCCCCCCCTTTATTTTCCCCCCCTTTTTTAAAAA
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