CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.235e-16
Identity = 44/90 (48.89%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YE+LGV+ +AT +EIK+AYRKL+ KYHPDVNKEP+A EKF  IK AY  L + + R  YD  G    +  +    S +     F GFG F
Sbjct:    7 YEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADPNQGFGGFRSDDFDLGGFSGFGGF 96          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.519e-16
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQD-EEFYGFGNF 486
            YEVLGV+ +AT DEIK+AYRKL+ +YHPD+NK P+A EKF  IK AY  L + E R +YD  G+   + ++  G      D   F GFG F
Sbjct:    7 YEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNEAFGGGFQGGGFDFGGFSGFGGF 97          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.413e-16
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-------------SGNRTSDFSYSTGPSQNAQDEEFYGFGN 483
            Y++LG+   A  DEIK+AYRK+ALKYHPD NKEPNAEEKF  I  AY+ L + + R  YD             SG  +  F Y+     +A    F+G  N
Sbjct:    6 YKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSN 106          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.413e-16
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-------------SGNRTSDFSYSTGPSQNAQDEEFYGFGN 483
            Y++LG+   A  DEIK+AYRK+ALKYHPD NKEPNAEEKF  I  AY+ L + + R  YD             SG  +  F Y+     +A    F+G  N
Sbjct:    6 YKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGSSGGSSGSFHYTFHGDPHATFASFFGGSN 106          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.229e-15
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YE+LGV+ SA A+E+KRAYR+LA KYHPDVNKEP AEEKF  I  AY  L + ++R  YD
Sbjct:    6 YEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANYD 65          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTR (Chaperone protein dnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.229e-15
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-----------SGNRTSDFSYSTGPSQNAQDEEFYGF 477
            YE+LGV+ +AT +EIK+AYRKL+ KYHPD+NKEP+A EKF  IK AY  L + + R  YD            G R+ DF +      +  D+ F  F
Sbjct:    7 YEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADPNQGFGGFRSDDFDFGGFSGFSGFDDIFSTF 103          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSU (Chaperone protein dnaJ OS=Bacillus subtilis GN=dnaJ PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.229e-15
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDV 498
            YEVLGV+ SA+ DEIK+AYRKL+ KYHPD+NKE  ++EKF  +K AY TL + + R  YD    T       G      D   +GF +    +
Sbjct:    7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSI 99          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 44/101 (43.56%), Postives = 55/101 (54.46%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-------------SGNRTSDFSYSTGPSQNAQDEEFYGFGN 483
            Y++LG+   A  DEIK+AYRK+ALKYHPD NKEPNAEEKF  I  AY+ L + + R  YD             SG     F Y+     +A    F+G  N
Sbjct:    6 YKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLKTGGGSSGGSGGSFHYTFHGDPHATFASFFGGSN 106          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJB (Chaperone protein dnaJ OS=Synechococcus sp. GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YE+LGV+  ++ +EIKRAYR+LA KYHPDVNKEP AEE+F  I  AY  L ++E + +YD   R  +   S   +  +  ++F G G F
Sbjct:    6 YEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSDNELKARYD---RFGEAGLSGAAAAASGFQDFAGMGGF 91          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACLD (Chaperone protein dnaJ OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 42/93 (45.16%), Postives = 52/93 (55.91%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDV 498
            YEVLGV  SA+ DEIK+AYRKL+ KYHPD+NKE  A EKF  +K AY TL + + R  YD    T       G      D   +GF +    +
Sbjct:    7 YEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSI 99          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_BACST3.235e-1648.89Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_GEOTN5.519e-1649.45Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNJB5_HUMAN9.413e-1643.56DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN9.413e-1643.56DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ_THEEB1.229e-1563.33Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_BACTR1.229e-1544.33Chaperone protein dnaJ OS=Bacillus thermoglucosida... [more]
DNAJ_BACSU1.229e-1544.09Chaperone protein dnaJ OS=Bacillus subtilis GN=dna... [more]
DNJB5_MOUSE1.606e-1543.56DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNAJ_SYNJB1.606e-1546.07Chaperone protein dnaJ OS=Synechococcus sp. GN=dna... [more]
DNAJ_BACLD1.606e-1545.16Chaperone protein dnaJ OS=Bacillus licheniformis (... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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