CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DJC16_PONAB (DnaJ homolog subfamily C member 16 OS=Pongo abelii GN=DNAJC16 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 1
Query:  217 PYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            PY+VLGV+ +A+  +IK+AY+KLA ++HPD NK+P AE+KF++I  AY  L N E R  YD  G+   +  Y     Q  Q +  Y F +F
Sbjct:   30 PYKVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGY-----QKQQQQREYRFRHF 115          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DJB14_BOVIN (DnaJ homolog subfamily B member 14 OS=Bos taurus GN=DNAJB14 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 1
Query:  190 LLRASRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLR--DVQITIEDFF 522
            +L  ++ ++ YEVLGV   A  +++K+AYRKLALK+HPD N  P A + F +I +AY  L N E R++YD           TG  + A +++  G  NF R  +  IT ED F
Sbjct:  100 VLSINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYD----------LTGNEEQACNQQNNGRFNFHRGCEADITPEDLF 202          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-----------------SGNRTSDFSYSTGPSQNAQDEEFYGFGN 483
            Y+ LG+A  A+ DEIKRAYR+ AL+YHPD NKEP AEEKF  I  AY+ L +   R  +D                  G   + FSY+     +A   EF+G  N
Sbjct:    6 YQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGSPSGGSSGGANGTSFSYTFHGDPHAMFAEFFGGRN 110          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STRU0 (Chaperone protein dnaJ OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 32/60 (53.33%), Postives = 46/60 (76.67%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            Y+ LGV+  A+ DEIK+AYRK++ KYHPD+NKEP AE+K+  ++ AY TL +++ R  YD
Sbjct:    7 YDRLGVSKDASQDEIKKAYRKMSKKYHPDINKEPGAEQKYKDVQEAYETLSDAQKRSAYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_EXIS2 (Chaperone protein dnaJ OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLGVA  A+A EIKRAYRKLA  YHPDVNKE +A++KF  +  AY  L +   R +YD
Sbjct:    7 YEVLGVARDASAAEIKRAYRKLARTYHPDVNKEADADQKFKELSEAYEVLSDDNQRARYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP8 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 8801) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 42/95 (44.21%), Postives = 55/95 (57.89%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-------SGNRTSDFSY-STGPSQNAQDEEFYGFG 480
            YE LGV  +A+ ++IKRAYR+LA KYHPD+NKE  AE++F  I  AY  L   E+R +YD       SG   + F Y   G   +  +  F GFG
Sbjct:    6 YETLGVDRNASKEDIKRAYRRLARKYHPDINKEAGAEDRFKEINRAYEVLSEPETRARYDQFGEAGVSGAGAAGFDYGDMGGFADIFETIFSGFG 100          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC4 (Chaperone protein dnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC2 (Chaperone protein dnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ1_ARATH (Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 1
Query:  184 STLLRASRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDVQITIED-FFKDLQEEFQN 549
            +T +  S   + Y+VLGV+P AT +EIK+++ +LA K+HPD N+  P+A+ KF  I+ AY TL NSE R +YD    R SD+  + G               F R  Q    D F K   E F+N
Sbjct:   38 ATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKFQEIREAYETLGNSERREEYDKLQYRNSDYVNNDGGDSE----------RFRRAYQSNFSDTFHKIFSEIFEN 152          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DJC16_PONAB1.151e-1343.96DnaJ homolog subfamily C member 16 OS=Pongo abelii... [more]
DJB14_BOVIN1.151e-1339.82DnaJ homolog subfamily B member 14 OS=Bos taurus G... [more]
DNJB1_MOUSE1.503e-1340.95DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNAJ_STRU01.503e-1353.33Chaperone protein dnaJ OS=Streptococcus uberis (st... [more]
DNAJ_EXIS21.503e-1360.00Chaperone protein dnaJ OS=Exiguobacterium sibiricu... [more]
DNAJ_CYAP81.503e-1344.21Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_BACCR1.503e-1356.67Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC41.503e-1356.67Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC21.503e-1356.67Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ1_ARATH1.503e-1338.40Chaperone protein dnaJ 1, mitochondrial OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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